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Structural dataset for the PPARγ V290M mutant.

Ana C Puhl1, Paul Webb2, Igor Polikarpov1

  • 1Instituto de Física de São Carlos, Universidade de São Paulo, Av. Trabalhador Saocarlense 400, São Carlos, SP 13560-970, Brazil.

Data in Brief
|October 21, 2016
PubMed
Summary
This summary is machine-generated.

A V290M mutation in peroxisome proliferator activated receptor gamma (PPARγ) causes ligand resistance syndrome. Structural data reveal how this mutation affects drug binding and receptor function, explaining clinical observations.

Keywords:
Nuclear receptorsPeroxisome proliferator activated receptor γX-ray structureç ligand resistance syndrome

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Area of Science:

  • Biochemistry
  • Structural Biology
  • Genetics

Background:

  • Loss-of-function mutation V290M in peroxisome proliferator activated receptor gamma (PPARγ) is linked to ligand resistance syndrome (PLRS).
  • PLRS presents with partial lipodystrophy and severe insulin resistance.

Purpose of the Study:

  • To present the X-ray diffraction dataset and 3D structural model of the PPARγ LBD V290M mutant.
  • To elucidate the molecular basis of PLRS associated with the V290M mutation.

Main Methods:

  • X-ray diffraction data collection and structure refinement at 2.3 Å resolution.
  • 3D model building of the PPARγ V290M mutant.

Main Results:

  • A high-confidence 3D model of the PPARγ V290M mutant was generated.
  • Continuous electron density revealed diclofenac bound to the PPARγ hydrophobic pocket.
  • Structural data correlate V290M mutation with impaired rosiglitazone binding and increased corepressor affinity.

Conclusions:

  • The structural data provide molecular insights into the pathogenesis of PLRS caused by the V290M mutation.
  • The findings explain the clinical observation of treatment failure with full PPARγ agonists like rosiglitazone.