Ensuring the safe and effective FDA regulation of fecal microbiota transplantation
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Updated: Mar 13, 2026

Therapeutic Evaluation of Fecal Microbiota Transplantation in an Interleukin 10-Deficient Mouse Model
Published on: April 6, 2022
Rachel E Sachs1, Carolyn A Edelstein2
1Petrie-Flom Center, Harvard Law School, 23 Everett Street, Room 325, Cambridge, MA 02138, USA.
Abstract:
Scientists, policymakers, and medical professionals alike have become increasingly worried about the rise of antibiotic resistance, and the growing number of infections due to bacteria like Clostridium difficile, which cause a significant number of deaths and are imposing increasing costs on our health care system. However, in the last few years, fecal microbiota transplantation (FMT), the transplantation of stool from a healthy donor into the bowel of a patient, has emerged as a startlingly effective means to treat recurrent C. difficile infections. At present, the FDA is proposing to regulate FMT as a biologic drug. However, this proposed classification is both underregulatory and overregulatory. The FDA's primary goal is to ensure that patients have access to safe, effective treatments-and as such they should regulate some aspects of FMT more stringently than they propose to, and others less so. This essay will examine the nature of the regulatory challenges the FDA will face in deciding to regulate FMT as a biologic drug, and will then evaluate available policy alternatives for the FDA to pursue, ultimately concluding that the FDA ought to consider adopting a hybrid regulatory model as it has done in the case of cord blood.
Insights
Fecal microbiota transplantation (FMT) effectively treats recurrent C. difficile infections. The FDA
Area of Science:
- Microbiology
- Gastroenterology
- Regulatory Science
Background:
- Antibiotic resistance and Clostridium difficile infections pose significant public health threats.
- Fecal microbiota transplantation (FMT) has emerged as a highly effective treatment for recurrent C. difficile infections.
- Current FDA proposals for regulating FMT as a biologic drug face challenges of being both under- and overregulatory.
Purpose of the Study:
- To examine the regulatory challenges the FDA faces in classifying FMT as a biologic drug.
- To evaluate policy alternatives for regulating FMT.
- To propose an optimal regulatory approach for FMT.
Main Methods:
- Analysis of current FDA regulatory proposals for FMT.
- Evaluation of potential policy alternatives for FMT regulation.
- Examination of regulatory models used for similar medical interventions, such as cord blood.
Main Results:
- The proposed FDA regulation of FMT as a biologic drug is identified as potentially under- and overregulatory.
- Existing regulatory frameworks may not optimally address the unique aspects of FMT.
- Alternative regulatory approaches are considered to ensure patient safety and treatment accessibility.
Conclusions:
- The FDA's regulation of FMT requires careful consideration to balance safety, efficacy, and accessibility.
- A hybrid regulatory model, similar to that used for cord blood, is proposed as a viable alternative.
- Optimizing FMT regulation is crucial for combating antibiotic resistance and improving patient outcomes.
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