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Measuring RAN Peptide Toxicity in C. elegans
Published on: April 30, 2020
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Distinct C9orf72-Associated Dipeptide Repeat Structures Correlate with Neuronal Toxicity.
Brittany N Flores1, Mark E Dulchavsky2, Amy Krans2
1Cellular and Molecular Biology Graduate Program, University of Michigan, Ann Arbor, Michigan, United States of America.
Plos One
|October 25, 2016
Summary
C9orf72 repeat expansions cause ALS/FTD via toxic dipeptides. Glycine-arginine (GR) peptides aggregate and reduce neuronal survival, while glycine-alanine (GA) peptides form beta-sheet structures that increase with age and toxicity.
Area of Science:
- Neuroscience
- Molecular Biology
- Biochemistry
Background:
- Hexanucleotide repeat expansions in the C9orf72 gene are the leading inherited cause of amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD).
- These expansions lead to toxic dipeptide repeat-containing proteins (DPRs) via repeat-associated non-AUG (RAN) translation.
- The structural properties and aggregation behaviors of these DPRs are not well understood.
Purpose of the Study:
- To investigate the structural characteristics and aggregation propensities of dipeptide units produced by C9orf72 RAN translation.
- To assess the relative toxicity of these dipeptides in primary cortical neurons.
- To correlate structural properties with observed toxicity.
Main Methods:
- Synthesis of three sense-strand dipeptide units from C9orf72 RAN translation.
- Structural analysis using circular dichroism, electron microscopy, and dye binding assays (Thioflavin T, Congo red).
- Assessment of neuronal toxicity and peptide internalization in primary cortical neurons.
Main Results:
- Short glycine-arginine (GR)3 peptides formed spherical aggregates and were toxic to neurons.
- Glycine-proline (GP)3 and glycine-alanine (GA)3 peptides showed different aggregation patterns.
- (GA)6 peptides formed beta-sheet rich aggregates, lacking typical amyloid morphology, with increased toxicity upon aging.
- Peptide toxicity correlated with cellular internalization.
Conclusions:
- C9orf72-related dipeptides possess distinct structural properties.
- These structural differences correlate with variations in their toxicity to neurons.
- Understanding these structure-toxicity relationships is crucial for C9orf72-related neurodegenerative diseases.

