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Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
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Altered Gut Microbiota Composition Associated with Eczema in Infants
Huajun Zheng1, Hong Liang1, Yuezhu Wang2
1Key Laboratory of Reproduction Regulation of NPFPC, SIPPR, IRD, Fudan University, Shanghai 200032, China.
Plos One
|November 5, 2016
Summary
Infant eczema is linked to altered gut bacteria. Specific bacterial genera and species differ between infants with eczema and healthy infants, offering insights into eczema risk factors.
Area of Science:
- Microbiome research
- Pediatric dermatology
- Gut health
Background:
- Eczema often signals an atopic condition in infants.
- Changes in gut microbiota diversity are noted in infants with eczema.
Purpose of the Study:
- To pinpoint specific bacterial communities associated with infant eczema.
- To compare gut microbiota composition between infants with and without eczema.
Main Methods:
- A case-control study involving 50 infants with eczema and 51 healthy controls.
- High-throughput sequencing of 16S rRNA gene V3-V4 regions from fecal samples.
- Analysis of operational taxonomic units (OTUs) to identify differences in bacterial abundance and composition.
Main Results:
- Gut microbiota showed differences in taxa abundance, not overall composition, between groups.
- Healthy infants had higher levels of Bifidobacterium, Megasphaera, Haemophilus, and Streptococcus.
- Infants with eczema showed enrichment of Escherichia/Shigella, Veillonella, Faecalibacterium, Lachnospiraceae incertae sedis, and Clostridium XlVa.
- Specific species like Faecalibacterium prausnitzii and Ruminococcus gnavus were enriched in eczematous infants.
- Akkermansia muciniphila abundance was higher in eczematous infants, potentially impacting gut barrier function.
- Beneficial bacteria like Bacteroides fragilis and Streptococcus salivarius were less abundant in infants with eczema.
Conclusions:
- Distinct gut microbial profiles are associated with infant eczema.
- Specific bacterial taxa may influence eczema development and severity.
- Findings suggest a link between gut microbiome alterations and eczema risk in infants.
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