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Detection and Visualization of DNA Damage-induced Protein Complexes in Suspension Cell Cultures Using the Proximity Ligation Assay
Published on: June 9, 2017
Ataxia telangiectasia mutated (ATM) interacts with p400 ATPase for an efficient DNA damage response
Rebecca J Smith1, Matthew S Savoian1, Lauren E Weber1
1Institute of Fundamental Sciences, Massey University, Palmerston North, New Zealand.
Background:
Ataxia telangiectasia mutated (ATM) and TRRAP proteins belong to the phosphatidylinositol 3-kinase-related kinase family and are involved in DNA damage repair and chromatin remodeling. ATM is a checkpoint kinase that is recruited to sites of DNA double-strand breaks where it phosphorylates a diverse range of proteins that are part of the chromatin and DNA repair machinery. As an integral subunit of the TRRAP-TIP60 complexes, p400 ATPase is a chromatin remodeler that is also targeted to DNA double-strand break sites. While it is understood that DNA binding transcriptional activators recruit p400 ATPase into a regulatory region of the promoter, how p400 recognises and moves to DNA double-strand break sites is far less clear. Here we investigate a possibility whether ATM serves as a shuttle to deliver p400 to break sites.
Results:
Our data indicate that p400 co-immunoprecipitates with ATM independently of DNA damage state and that the N-terminal domain of p400 is vital for this interaction. Heterologous expression studies using Sf9 cells revealed that the ATM-p400 complex can be reconstituted without other mammalian bridging proteins. Overexpression of ATM-interacting p400 regions in U2OS cells induced dominant negative effects including the inhibition of both DNA damage repair and cell proliferation. Consistent with the dominant negative effect, the stable expression of an N-terminal p400 fragment showed a decrease in the association of p400 with ATM, but did not alter the association of p400 with TRRAP.
Conclusion:
Taken together, our findings suggest that a protein-protein interaction between ATM and p400 ATPase occurs independently of DNA damage and contributes to efficient DNA damage response and repair.
Insights
Ataxia telangiectasia mutated (ATM) protein acts as a shuttle, delivering p400 ATPase to DNA double-strand break sites. This interaction is crucial for DNA damage repair and cell proliferation, independent of DNA damage.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Ataxia telangiectasia mutated (ATM) and TRRAP proteins are key players in DNA repair and chromatin remodeling.
- ATM is a checkpoint kinase activated at DNA double-strand breaks, phosphorylating repair proteins.
- p400 ATPase, a chromatin remodeler, is also recruited to break sites, but its targeting mechanism is unclear.
Purpose of the Study:
- To investigate if ATM serves as a shuttle to deliver p400 ATPase to DNA double-strand break sites.
- To elucidate the mechanism of p400 ATPase recruitment to DNA damage sites.
Main Methods:
- Co-immunoprecipitation assays to detect ATM-p400 interaction.
- Heterologous expression studies in Sf9 cells to reconstitute the ATM-p400 complex.
- Dominant-negative effect studies using U2OS cells with overexpressed ATM-interacting p400 regions.
Main Results:
- p400 co-immunoprecipitates with ATM independently of DNA damage, with the N-terminal domain of p400 being crucial for this interaction.
- The ATM-p400 complex can be reconstituted in Sf9 cells without other mammalian bridging proteins.
- Overexpression of ATM-interacting p400 regions induced dominant-negative effects, inhibiting DNA damage repair and cell proliferation.
Conclusions:
- A protein-protein interaction between ATM and p400 ATPase occurs independently of DNA damage.
- This ATM-p400 interaction is essential for efficient DNA damage response and repair.
- ATM acts as a shuttle for p400 ATPase to DNA break sites, impacting cell proliferation.
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