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Published on: March 10, 2020
SAPOVIRUSES IN CHILDREN WITH ACUTE GASTROENTERITIS FROM MANAUS , AMAZON REGION, BRAZIL, 2010-2011
Tammy Kathlyn Amaral Reymão1, Juliana das Merces Hernandez1, Samya Thalita Picanço da Costa2
1Evandro Chagas Institute, Postgraduate Program in Virology. Ananindeua, Pará, Brazil. E-mails: tammykathlyn@gmail.com; julianamhernandez@gmail.com.
Insights
Sapoviruses (SaVs) cause acute gastroenteritis in children. This study found SaVs in 3.8% of young children hospitalized with gastroenteritis in Manaus, Brazil, detecting multiple genotypes.
Area of Science:
- Virology
- Public Health
- Pediatrics
Background:
- Sapoviruses (SaVs) are a significant cause of acute gastroenteritis, particularly in young children and the elderly.
- Epidemiological data on SaVs in Brazil, especially Northern Brazil, are scarce.
- Understanding SaVs circulation is crucial for public health interventions, particularly in vulnerable populations.
Purpose of the Study:
- To investigate the prevalence and genetic diversity of Sapoviruses in hospitalized children with acute gastroenteritis in Manaus, Amazonas, Brazil.
- To identify circulating SaVs genotypes and understand their phylogenetic relationships.
- To establish baseline data on SaVs infections in a previously understudied region.
Main Methods:
- Fecal samples were collected from 156 hospitalized children under ten years old presenting with acute gastroenteritis.
- Samples were screened for SaVs using reverse transcription-polymerase chain reaction (RT-PCR).
- Positive samples were genotyped, and phylogenetic analysis was conducted using reference sequences from GenBank.
Main Results:
- A SaVs positivity rate of 3.8% was detected, primarily in children under three years of age.
- Four distinct genotypes were identified: GI.1, GI.2, GII.2?-GII.4?/GII.4, with evidence suggesting potential inter-genotypic recombination.
- The majority of infections (83.3%) occurred during the August-September period, indicating seasonal patterns.
Conclusions:
- This study provides the first report of Sapovirus circulation in Manaus, Amazonas, confirming its presence in Northern Brazil.
- The detection of multiple SaVs genotypes highlights the genetic diversity of the virus in the region.
- Findings contribute valuable epidemiological data, comparable to international findings, and underscore the need for continued surveillance of SaVs in Brazil.
Abstract:
Sapoviruses (SaVs) are responsible for acute gastroenteritis in humans, especially children and the elderly. In Brazil, data on SaVs infections are very limited, especially in Northern Brazil. Here, we investigated the occurrence of SaVs in samples from hospitalized children under ten years old that presented acute gastroenteritis. Positive samples were genotyped and phylogenetic analysis was performed using prototype strains sequences obtained from GenBank database. In total, 156 fecal samples were screened by RT-PCR for SaVs. A positivity rate of 3.8% (6/156) was found in children under three years of age. Four genotypes were detected: GI.I, GI.2 and GII.2?-GII.4?/GII.4, suggesting a possible inter-genotypes recombination. Most infections (83.3%) occurred between August and September. The positivity was similar to that found in other countries and genotyping demonstrated the presence of distinct genotypes. To our knowledge, this is the first study reporting the circulation of SaVs in Manaus, state of Amazonas, Amazon region, Brazil.
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