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Updated: Nov 19, 2025

MicroRNA-based Regulation of Picornavirus Tropism
Published on: February 6, 2017
Hepatitis-C-virus-induced microRNAs dampen interferon-mediated antiviral signaling
Abigail Jarret1, Adelle P McFarland1, Stacy M Horner1
1Department of Immunology, University of Washington, Seattle, Washington, USA.
Abstract:
Hepatitis C virus (HCV) infects 200 million people globally, and 60-80% of cases persist as a chronic infection that will progress to cirrhosis and liver cancer in 2-10% of patients. We recently demonstrated that HCV induces aberrant expression of two host microRNAs (miRNAs), miR-208b and miR-499a-5p, encoded by myosin genes in infected hepatocytes. These miRNAs, along with AU-rich-element-mediated decay, suppress IFNL2 and IFNL3, members of the type III interferon (IFN) gene family, to support viral persistence. In this study, we show that miR-208b and miR-499a-5p also dampen type I IFN signaling in HCV-infected hepatocytes by directly down-regulating expression of the type I IFN receptor chain, IFNAR1. Inhibition of these miRNAs by using miRNA inhibitors during HCV infection increased expression of IFNAR1. Additionally, inhibition rescued the antiviral response to exogenous type I IFN, as measured by a marked increase in IFN-stimulated genes and a decrease in HCV load. Treatment of HCV-infected hepatocytes with type I IFN increased expression of myosins over HCV infection alone. Since these miRNAs can suppress type III IFN family members, these data collectively define a novel cross-regulation between type I and III IFNs during HCV infection.
Insights
Hepatitis C virus (HCV) uses host microRNAs (miRNAs) to suppress both type I and III interferons, hindering the immune response. Inhibiting these specific miRNAs restores interferon signaling and reduces viral load in infected cells.
Area of Science:
- Virology
- Immunology
- Molecular Biology
Background:
- Hepatitis C virus (HCV) causes chronic infections in millions globally, leading to severe liver disease.
- HCV establishes persistence by suppressing host antiviral defenses, including interferon responses.
- Previously identified host microRNAs (miRNAs), miR-208b and miR-499a-5p, suppress type III interferons (IFNL2/3) during HCV infection.
Purpose of the Study:
- To investigate the role of miR-208b and miR-499a-5p in modulating type I interferon signaling during HCV infection.
- To determine if inhibiting these miRNAs can restore antiviral responses in HCV-infected hepatocytes.
Main Methods:
- HCV-infected human hepatocytes were treated with miRNA inhibitors targeting miR-208b and miR-499a-5p.
- Expression levels of IFNAR1, type I and III interferons, and interferon-stimulated genes were quantified.
- HCV viral load was measured following miRNA inhibition and exogenous type I interferon treatment.
Main Results:
- miR-208b and miR-499a-5p were found to directly down-regulate the type I interferon receptor chain (IFNAR1) in HCV-infected hepatocytes.
- Inhibition of these miRNAs increased IFNAR1 expression and restored sensitivity to exogenous type I interferon.
- MiRNA inhibition led to increased interferon-stimulated gene expression and a significant decrease in HCV viral load.
Conclusions:
- HCV utilizes miR-208b and miR-499a-5p to suppress both type I and type III interferon pathways.
- These miRNAs target IFNAR1, dampening the type I interferon response and promoting viral persistence.
- Targeting these specific miRNAs represents a potential therapeutic strategy to enhance antiviral immunity against HCV.
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