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Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance
Published on: December 28, 2017
Echinocandin Resistance in Candida Species Isolates from Liver Transplant Recipients
Gwénolé Prigent1, Nawel Aït-Ammar1,2, Eric Levesque3
1Unité de Parasitologie-Mycologie, Département de Virologie, Bactériologie-Hygiène, Parasitologie-Mycologie, DHU VIC, CHU Henri Mondor, AP-HP, Créteil, France.
Abstract:
Liver transplant recipients are at risk of invasive fungal infections, especially candidiasis. Echinocandin is recommended as prophylactic treatment but is increasingly associated with resistance. Our aim was to assess echinocandin drug resistance in Candida spp. isolated from liver transplant recipients treated with this antifungal class. For this, all liver-transplanted patients in a University Hospital (Créteil, France) between January and June of 2013 and 2015 were included. Susceptibilities of Candida isolates to echinocandins were tested by Etest and the EUCAST reference method. Isolates were analyzed by FKS sequencing and genotyped based on microsatellites or multilocus sequence typing (MLST) profiles. Ninety-four patients were included, and 39 patients were colonized or infected and treated with echinocandin. Echinocandin resistance appeared in 3 (8%) of the treated patients within 1 month of treatment. One patient was colonized by resistant Candida glabrata, one by resistant Candida dubliniensis, and one by resistant Candida albicans Molecular analysis found three mutations in FKS2 HS1 (F659S, S663A, and D666E) for C. glabrata and one mutation in FKS1 HS1 (S645P) for C. dubliniensis and C. albicans Susceptible and resistant isolates belonged to the same genotype. To our knowledge, this is the first study on echinocandin resistance in Candida spp. in a liver transplant population. Most resistant isolates were found around/in digestive sites, perhaps due to lower diffusion of echinocandin in these sites. This work documents the risk of emergence of resistance to echinocandin, even after short-term treatment.
Insights
Echinocandin antifungal resistance emerged in 8% of liver transplant patients within one month of prophylaxis. This study highlights the risk of developing echinocandin resistance in Candida species, even with short-term treatment.
Area of Science:
- Medical Mycology
- Infectious Diseases
- Transplantation Medicine
Background:
- Liver transplant recipients face a high risk of invasive fungal infections, particularly candidiasis.
- Echinocandins are recommended for antifungal prophylaxis but increasing resistance is a concern.
Purpose of the Study:
- To evaluate echincoandin drug resistance in Candida species isolated from liver transplant recipients.
- To investigate the emergence of echinocandin resistance during prophylactic treatment in this patient population.
Main Methods:
- Prospective study of liver transplant patients receiving echinocandin prophylaxis.
- Susceptibility testing of Candida isolates using Etest and EUCAST methods.
- Molecular analysis including FKS gene sequencing and genotyping (microsatellites/MLST).
Main Results:
- Echinocandin resistance was observed in 3 (8%) of 39 treated patients within one month.
- Resistant isolates included Candida glabrata, Candida dubliniensis, and Candida albicans.
- Specific FKS gene mutations (FKS2 and FKS1) were identified in resistant isolates.
Conclusions:
- This study is the first to document echinocandin resistance in Candida species within a liver transplant population.
- Emergence of resistance can occur even after short-term echinocandin treatment.
- Lower echinocandin diffusion in digestive sites may contribute to resistance development.
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