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Draft Genome Sequence for a Urinary Isolate of Nosocomiicoccus ampullae
Evann E Hilt1, Travis K Price1, Katherine Diebel1
1Department of Microbiology and Immunology, Stritch School of Medicine, Health Sciences Division, Loyola University Chicago, Maywood, Illinois, USA.
Genome Announcements
|November 19, 2016
Summary
Researchers sequenced the genome of Nosocomiicoccus ampullae (UMB0853), a urinary tract bacterium. This draft genome provides insights into the bacterium's genetic makeup and potential virulence factors.
Area of Science:
- Microbiology
- Genomics
- Bioinformatics
Background:
- Nosocomiicoccus ampullae is a bacterium that can cause urinary tract infections.
- Understanding the genome of pathogenic bacteria is crucial for developing effective treatments.
Purpose of the Study:
- To perform draft genome sequencing of a urinary isolate of Nosocomiicoccus ampullae (UMB0853).
- To annotate the genome and identify key genetic features.
Main Methods:
- Whole-genome sequencing using high-throughput sequencing technology.
- Bioinformatic analysis for genome assembly and annotation.
- Identification of rRNA, tRNA, and protein-coding sequences.
Main Results:
- The draft genome size is 1,578,043 base pairs with a G+C content of 36.1%.
- The genome contains 10 rRNA sequences, 40 tRNA genes, and 1,532 protein-coding sequences.
- Genome assembly resulted in 32 contigs with an N50 of 109,831 bp and a coverage of 727×.
Conclusions:
- The draft genome sequence of Nosocomiicoccus ampullae (UMB0853) provides a valuable genetic resource.
- This genomic data can facilitate further research into the bacterium's biology, pathogenicity, and antimicrobial resistance.
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