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SRF Co-factors Control the Balance between Cell Proliferation and Contractility
Francesco Gualdrini1, Cyril Esnault1, Stuart Horswell2
1Signalling and Transcription Group, Francis Crick Institute, 1 Midland Rd, London NW1 1AT, UK.
Abstract:
The ERK-regulated ternary complex factors (TCFs) act with the transcription factor serum response factor (SRF) to activate mitogen-induced transcription. However, the extent of their involvement in the immediate-early transcriptional response, and their wider functional significance, has remained unclear. We show that, in MEFs, TCF inactivation significantly inhibits over 60% of TPA-inducible gene transcription and impairs cell proliferation. Using integrated SRF ChIP-seq and Hi-C data, we identified over 700 TCF-dependent SRF direct target genes involved in signaling, transcription, and proliferation. These also include a significant number of cytoskeletal gene targets for the Rho-regulated myocardin-related transcription factor (MRTF) SRF cofactor family. The TCFs act as general antagonists of MRTF-dependent SRF target gene expression, competing directly with the MRTFs for access to SRF. As a result, TCF-deficient MEFs exhibit hypercontractile and pro-invasive behavior. Thus, competition between TCFs and MRTFs for SRF determines the balance between antagonistic proliferative and contractile programs of gene expression.
Insights
Ternary complex factors (TCFs) and serum response factor (SRF) control gene transcription. TCFs antagonize myocardin-related transcription factors (MRTFs), balancing cell proliferation and contraction.
Area of Science:
- Molecular Biology
- Cell Biology
- Gene Regulation
Background:
- Ternary complex factors (TCFs) partner with serum response factor (SRF) to drive gene transcription in response to mitogens.
- The precise role and broader functional impact of TCFs in immediate-early gene responses remain incompletely understood.
Purpose of the Study:
- To elucidate the functional significance of TCFs in regulating gene transcription and cell proliferation.
- To investigate the interplay between TCFs, SRF, and MRTFs in controlling gene expression programs.
Main Methods:
- CRISPR-Cas9 mediated TCF inactivation in mouse embryonic fibroblasts (MEFs).
- Chromatin immunoprecipitation sequencing (ChIP-seq) for SRF.
- Hi-C for genome-wide interaction analysis.
- Analysis of TPA-inducible gene transcription and cell proliferation.
Main Results:
- TCF inactivation inhibited over 60% of TPA-inducible genes and impaired MEF proliferation.
- Over 700 direct SRF target genes were identified as TCF-dependent, involved in signaling, transcription, and proliferation.
- TCFs antagonize MRTF-mediated SRF target gene expression by competing for SRF binding.
- TCF-deficient MEFs displayed hypercontractile and pro-invasive phenotypes.
Conclusions:
- Competition between TCFs and MRTFs for SRF binding is a critical determinant of gene expression.
- This competition balances opposing cellular programs, including proliferation and cytoskeletal contractility.
- TCFs play a vital role in regulating gene transcription, cell proliferation, and cellular behavior.
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