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Updated: Mar 11, 2026

Author Spotlight: Quantitative Detection of DNA Protein Crosslinks and Their Post-Translational Modifications
Published on: April 21, 2023
Metalloprotease SPRTN/DVC1 Orchestrates Replication-Coupled DNA-Protein Crosslink Repair
Bruno Vaz1, Marta Popovic1, Joseph A Newman2
1Cancer Research UK and Medical Research Council Oxford Institute for Radiation Oncology, Department of Oncology, University of Oxford, Oxford OX3 7DQ, UK.
Abstract:
The cytotoxicity of DNA-protein crosslinks (DPCs) is largely ascribed to their ability to block the progression of DNA replication. DPCs frequently occur in cells, either as a consequence of metabolism or exogenous agents, but the mechanism of DPC repair is not completely understood. Here, we characterize SPRTN as a specialized DNA-dependent and DNA replication-coupled metalloprotease for DPC repair. SPRTN cleaves various DNA binding substrates during S-phase progression and thus protects proliferative cells from DPC toxicity. Ruijs-Aalfs syndrome (RJALS) patient cells with monogenic and biallelic mutations in SPRTN are hypersensitive to DPC-inducing agents due to a defect in DNA replication fork progression and the inability to eliminate DPCs. We propose that SPRTN protease represents a specialized DNA replication-coupled DPC repair pathway essential for DNA replication progression and genome stability. Defective SPRTN-dependent clearance of DPCs is the molecular mechanism underlying RJALS, and DPCs are contributing to accelerated aging and cancer.
Insights
SPRTN protease repairs DNA-protein crosslinks (DPCs) that block DNA replication. This discovery reveals a new pathway essential for genome stability and understanding diseases like Ruijs-Aalfs syndrome.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- DNA-protein crosslinks (DPCs) are cytotoxic lesions that impede DNA replication.
- Cellular mechanisms for repairing DPCs are not fully elucidated.
- DPCs arise from endogenous metabolic processes and exogenous agents.
Purpose of the Study:
- To identify and characterize novel factors involved in DNA-protein crosslink repair.
- To elucidate the role of SPRTN protease in maintaining genome stability during DNA replication.
- To understand the molecular basis of Ruijs-Aalfs syndrome (RJALS).
Main Methods:
- Biochemical assays to assess protease activity.
- Cell-based studies using patient-derived cells with SPRTN mutations.
- Analysis of DNA replication fork progression and DPC clearance.
Main Results:
- SPRTN is identified as a DNA-dependent metalloprotease that cleaves DNA-binding substrates.
- SPRTN functions in a DNA replication-coupled manner to remove DPCs.
- SPRTN deficiency in RJALS cells leads to replication fork stalling and hypersensitivity to DPC-inducing agents.
Conclusions:
- SPRTN protease mediates a specialized DNA replication-coupled pathway for DPC repair.
- Defects in SPRTN-dependent DPC clearance underlie RJALS pathogenesis.
- SPRTN is crucial for protecting proliferative cells from DPC toxicity, impacting genome stability, aging, and cancer risk.
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