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Generating Transposon Insertion Libraries in Gram-Negative Bacteria for High-Throughput Sequencing
Published on: July 7, 2020
MCR: modern colistin resistance
I Caniaux1, A van Belkum2, G Zambardi2
1Medical Affairs, bioMérieux SA, 376, Chemin de l'Orme, 69280, Marcy L'Etoile, France.
Abstract:
Recently, plasmid-mediated and, therefore, transferable bacterial polymyxin resistance was discovered in strains from both humans and animals. Such a trait may widely spread geographically, while simultaneously crossing microbial species barriers. This may ultimately render the "last resort" polymyxin antibiotics therapeutically useless. Colistin is currently used to treat infections caused by Gram-negative carbapenemase producers and colistin resistance may lead to practical pan-antibiotic resistance. We here analyzed the medical and diagnostic consequences of (emerging) colistin resistance and propose pathways toward adequate diagnostics for timely detection of both asymptomatic carriage and infection. Culture-based testing using chromogenic and selective media for screening clinical (and veterinary) specimens may constitute key tools for that purpose. Relevant molecular tests are also discussed.
Insights
Transferable polymyxin resistance in bacteria is emerging in humans and animals, threatening the effectiveness of last-resort antibiotics like colistin. Timely detection through diagnostics is crucial to combat this growing threat.
Area of Science:
- Microbiology
- Infectious Diseases
- Antimicrobial Resistance
Background:
- Plasmid-mediated, transferable polymyxin resistance has been identified in bacterial strains from human and animal sources.
- This resistance mechanism poses a significant threat of geographic spread and inter-species transmission.
- The rise of colistin resistance, particularly in Gram-negative carbapenemase producers, could lead to pan-antibiotic resistance, rendering critical treatments ineffective.
Purpose of the Study:
- To analyze the medical and diagnostic implications of emerging colistin resistance.
- To propose effective diagnostic strategies for the early detection of colistin resistance in both asymptomatic carriers and infected individuals.
Main Methods:
- Review and analysis of current medical and diagnostic challenges posed by colistin resistance.
- Discussion of culture-based diagnostic methods, including chromogenic and selective media for screening clinical and veterinary specimens.
- Evaluation of relevant molecular diagnostic tests for detecting colistin resistance.
Main Results:
- Emerging transferable colistin resistance presents a serious global health risk, potentially compromising the efficacy of polymyxin antibiotics.
- Current diagnostic approaches need enhancement to effectively identify and manage colistin-resistant bacterial infections and carriage.
- Culture-based and molecular tests are vital for timely detection and surveillance.
Conclusions:
- Urgent development and implementation of adequate diagnostic tools are necessary to combat the spread of colistin resistance.
- Effective diagnostics will aid in managing infections caused by resistant bacteria and preventing the loss of polymyxin efficacy.
- A multi-faceted approach combining culture-based and molecular methods is recommended for comprehensive detection.
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