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Quantification of Pathway Cross-talk Reveals Novel Synergistic Drug Combinations for Breast Cancer
Samira Jaeger1, Ana Igea1, Rodrigo Arroyo1
1Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Barcelona, Catalonia, Spain.
Abstract:
Combinatorial therapeutic approaches are an imperative to improve cancer treatment, because it is critical to impede compensatory signaling mechanisms that can engender drug resistance to individual targeted drugs. Currently approved drug combinations result largely from empirical clinical experience and cover only a small fraction of a vast therapeutic space. Here we present a computational network biology approach, based on pathway cross-talk inhibition, to discover new synergistic drug combinations for breast cancer treatment. In silico analysis identified 390 novel anticancer drug pairs belonging to 10 drug classes that are likely to diminish pathway cross-talk and display synergistic antitumor effects. Ten novel drug combinations were validated experimentally, and seven of these exhibited synergy in human breast cancer cell lines. In particular, we found that one novel combination, pairing the estrogen response modifier raloxifene with the c-Met/VEGFR2 kinase inhibitor cabozantinib, dramatically potentiated the drugs' individual antitumor effects in a mouse model of breast cancer. When compared with high-throughput combinatorial studies without computational prioritization, our approach offers a significant advance capable of uncovering broad-spectrum utility across many cancer types. Cancer Res; 77(2); 459-69. ©2016 AACR.
Insights
This study introduces a computational approach to discover effective cancer drug combinations by targeting pathway crosstalk. It identified novel synergistic pairs, including raloxifene and cabozantinib, showing potent antitumor effects in preclinical models.
Area of Science:
- Oncology
- Computational Biology
- Pharmacology
Background:
- Combinatorial cancer therapy is crucial to overcome drug resistance from compensatory signaling pathways.
- Current drug combinations are limited, often based on empirical data, leaving vast therapeutic potential unexplored.
Purpose of the Study:
- To develop a computational network biology strategy for identifying novel synergistic drug combinations for breast cancer treatment.
- To discover drug pairs that inhibit pathway crosstalk, thereby enhancing antitumor efficacy.
Main Methods:
- Utilized in silico analysis based on pathway crosstalk inhibition to identify potential synergistic drug pairs.
- Screened 390 novel anticancer drug pairs across 10 drug classes.
- Experimentally validated 10 novel drug combinations in human breast cancer cell lines and a mouse model.
Main Results:
- Identified 390 potential synergistic drug pairs predicted to diminish pathway crosstalk.
- Seven of ten experimentally validated combinations demonstrated synergy in human breast cancer cell lines.
- The combination of raloxifene and cabozantinib showed dramatically enhanced antitumor effects in a preclinical breast cancer model.
Conclusions:
- The computational network biology approach effectively identifies novel synergistic drug combinations.
- This method significantly advances the discovery of broad-spectrum anticancer therapies compared to traditional high-throughput screening.
- Validated combinations, like raloxifene with cabozantinib, offer promising therapeutic strategies for breast cancer.
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