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Updated: Mar 11, 2026

Study of Protein-protein Interactions in Autophagy Research
Published on: September 9, 2017
RNF166 Determines Recruitment of Adaptor Proteins during Antibacterial Autophagy
Robert J Heath1, Gautam Goel1, Leigh A Baxt1
1Gastrointestinal Unit and Center for the Study of Inflammatory Bowel Disease, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA; Center for Computational and Integrative Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Abstract:
Xenophagy is a form of selective autophagy that involves the targeting and elimination of intracellular pathogens through several recognition, recruitment, and ubiquitination events. E3 ubiquitin ligases control substrate selectivity in the ubiquitination cascade; however, systematic approaches to map the role of E3 ligases in antibacterial autophagy have been lacking. We screened more than 600 putative human E3 ligases, identifying E3 ligases that are required for adaptor protein recruitment and LC3-bacteria colocalization, critical steps in antibacterial autophagy. An unbiased informatics approach pinpointed RNF166 as a key gene that interacts with the autophagy network and controls the recruitment of ubiquitin as well as the autophagy adaptors p62 and NDP52 to bacteria. Mechanistic studies demonstrated that RNF166 catalyzes K29- and K33-linked polyubiquitination of p62 at residues K91 and K189. Thus, our study expands the catalog of E3 ligases that mediate antibacterial autophagy and identifies a critical role for RNF166 in this process.
Insights
Researchers identified RNF166 as a key E3 ubiquitin ligase in antibacterial autophagy. This finding expands the understanding of how cells eliminate pathogens via selective autophagy.
Area of Science:
- Cellular Biology
- Immunology
- Molecular Biology
Background:
- Xenophagy is selective autophagy crucial for eliminating intracellular pathogens.
- E3 ubiquitin ligases are vital for substrate selectivity in ubiquitination but their role in antibacterial autophagy is not fully mapped.
Purpose of the Study:
- To systematically screen human E3 ligases for their roles in antibacterial autophagy.
- To identify key regulators of adaptor protein and ubiquitin recruitment to bacteria during xenophagy.
Main Methods:
- Screened over 600 putative human E3 ligases.
- Utilized unbiased informatics to identify key genes.
- Performed mechanistic studies to elucidate ubiquitination events.
Main Results:
- Identified E3 ligases essential for adaptor protein recruitment and LC3-bacteria colocalization.
- Pinpointed RNF166 as a critical E3 ligase regulating ubiquitin and adaptor protein (p62, NDP52) recruitment to bacteria.
- Demonstrated RNF166 catalyzes K29- and K33-linked polyubiquitination of p62.
Conclusions:
- Expands the known repertoire of E3 ligases involved in antibacterial autophagy.
- Establishes a critical role for RNF166 in mediating xenophagy through specific p62 polyubiquitination.
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