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Updated: Mar 11, 2026

Isolation and Quantification of Axonal mRNAs Using Porous Membrane Inserts and RTddPCR
Published on: February 6, 2026
Axonal Degeneration Is Regulated by a Transcriptional Program that Coordinates Expression of Pro- and
Maya Maor-Nof1, Erez Romi1, Hadas Sar Shalom1
1Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 76100, Israel.
Abstract:
Developmental neuronal cell death and axonal elimination are controlled by transcriptional programs, of which their nature and the function of their components remain elusive. Here, we identified the dual specificity phosphatase Dusp16 as part of trophic deprivation-induced transcriptome in sensory neurons. Ablation of Dusp16 enhanced axonal degeneration in response to trophic withdrawal, suggesting that it has a protective function. Moreover, axonal skin innervation was severely reduced while neuronal elimination was increased in the Dusp16 knockout. Mechanistically, Dusp16 negatively regulates the transcription factor p53 and antagonizes the expression of the pro-degenerative factor, Puma (p53 upregulated modulator of apoptosis). Co-ablation of Puma with Dusp16 protected axons from rapid degeneration and specifically reversed axonal innervation loss early in development with no effect on neuronal deficits. Overall, these results reveal that physiological axonal elimination is regulated by a transcriptional program that integrates regressive and progressive elements and identify Dusp16 as a new axonal preserving factor.
Insights
Dual specificity phosphatase Dusp16 protects sensory neuron axons from degeneration during development. Dusp16 antagonizes p53 and Puma, preserving axonal integrity and skin innervation.
Area of Science:
- Neuroscience
- Molecular Biology
- Developmental Biology
Background:
- Neuronal cell death and axonal elimination are critical developmental processes.
- The transcriptional programs governing these events and their components are not fully understood.
Purpose of the Study:
- To identify novel factors involved in developmental axonal elimination.
- To elucidate the function and mechanism of dual specificity phosphatase Dusp16 in sensory neuron development.
Main Methods:
- Transcriptome analysis of sensory neurons under trophic deprivation.
- Gene knockout studies of Dusp16 and Puma in mice.
- Assessment of axonal degeneration, innervation, and neuronal survival.
Main Results:
- Dusp16 was identified in the trophic deprivation-induced transcriptome.
- Dusp16 deficiency exacerbated axonal degeneration and reduced skin innervation.
- Dusp16 negatively regulates p53 and antagonizes Puma expression.
- Simultaneous knockout of Puma and Dusp16 rescued axonal degeneration and innervation deficits.
Conclusions:
- Dusp16 acts as an axonal preserving factor during development.
- Physiological axonal elimination involves a transcriptional program integrating regressive and progressive elements.
- Dusp16's mechanism involves the p53-Puma pathway.
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