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Updated: Mar 11, 2026

Metabolic Support of Excised, Living Brain Tissues During Magnetic Resonance Microscopy Acquisition
Published on: October 18, 2017
Probing metabolite diffusion at ultra-short time scales in the mouse brain using optimized oscillating gradients and
Clémence Ligneul1,2, Julien Valette1,2
1Commissariat à l'Énergie Atomique et aux Énergies Alternatives (CEA), Direction de la Recherche Fondamentale (DRF), Institut d'Imagerie Biomédicale (I2BM), MIRCen, F-92260, Fontenay-aux-Roses, France.
Abstract:
Measuring diffusion at ultra-short time scales may yield information about short-range intracellular structure and cytosol viscosity. However, reaching such time scales usually requires oscillating gradients, which in turn imply long echo times TE . Here we propose a new kind of stretched oscillating gradient that allows us to increase diffusion-weighting b while preserving spectral and temporal properties of the gradient modulation. We used these optimized gradients to measure metabolite diffusion in the mouse brain down to effective diffusion times of 1 ms while keeping TE relatively short (60 ms). At such TE , a significant macromolecule signal could still be observed and used as an internal reference of approximately null diffusivity, which proved critical to discard datasets corrupted by some motion artifact. The methods introduced here may be useful to improve the accuracy and precision of metabolite apparent diffusion coefficient measurements with oscillating gradients.

