Differential crosstalk between global DNA methylation and metabolomics associated with cell type specific stress

Nivedita Chatterjee1, Jisu Yang1, Dahye Yoon2

  • 1School of Environmental Engineering, University of Seoul, 163 Siripdaero, Dongdaemun-gu, Seoul 02504, South Korea.

Biomaterials
|December 4, 2016
PubMed

Insights

Surface functionalization of multi-walled carbon nanotubes (MWCNT) reduces their toxicity. Functionalized MWCNT showed reduced cellular uptake and toxicity compared to pristine MWCNT, impacting gene expression and DNA methylation differently across cell types.

Area of Science:

  • Toxicology
  • Nanomaterial Science
  • Epigenetics

Background:

  • Multi-walled carbon nanotubes (MWCNT) are widely used but their toxicity mechanisms require detailed investigation.
  • Cell specificity and the role of surface functionalization in MWCNT toxicity are not fully understood.

Purpose of the Study:

  • To elucidate the comprehensive mechanisms of MWCNT-induced toxicity.
  • To evaluate the impact of surface functionalization (hydroxylation/carboxylation) on MWCNT toxicity and cell specificity.
  • To investigate intracellular uptake, toxicological endpoints, metabolomics, and DNA methylation.

Main Methods:

  • In vitro exposure of human bronchial epithelial (BEAS-2B) and human hepatoma (HepG2) cell lines to pristine and functionalized MWCNT.
  • Assessment of intracellular uptake using surface-enhanced Raman scattering and dark-field microscopy.
  • Evaluation of toxicological endpoints, global metabolomics, and DNA methylation (DNMT3B-dependent).

Main Results:

  • Surface functionalization significantly diminished the toxic potential of MWCNT compared to pristine counterparts.
  • Functionalized MWCNT demonstrated intracellular uptake, unlike pristine MWCNT.
  • MWCNT exposure induced cell-type and surface-functionalization-dependent alterations in stress responses, gene expression, metabolomics, and DNA methylation patterns.

Conclusions:

  • Surface functionalization is a key factor in modulating MWCNT toxicity and cellular interactions.
  • Differential metabolomic profiles and DNA methylation patterns underlie cell-type specificity and gene expression changes induced by MWCNT.
  • Findings provide preliminary evidence for epigenetic modifications and metabolomics in MWCNT risk assessment.