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Evolvix BEST Names for semantic reproducibility across code2brain interfaces.

Laurence Loewe1,2, Katherine S Scheuer1, Seth A Keel1,2

  • 1Wisconsin Institute for Discovery.

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|December 6, 2016
PubMed
Summary
This summary is machine-generated.

Effective programming names are crucial for code comprehension and data interpretation. The Evolvix BEST Names concept improves code clarity and semantic reproducibility, reducing complexity in software development.

Keywords:
debugging code2brain interfacesevolutionary systems biology simulationsflipped programming language designfundamental modes of computingnames of identifiers in codeontology computingprogramming language paradigms and naming

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Area of Science:

  • Computer Science
  • Bioinformatics
  • Software Engineering

Background:

  • Programming names are essential for understanding code and big data.
  • Code2Brain (C2B) interfaces link programming syntax to meaning, aiding code comprehension.
  • Ensuring long-term backward compatibility and semantic reproducibility is vital for C2B interfaces.

Purpose of the Study:

  • To investigate the impact of naming conventions on C2B interface quality.
  • To address the challenges of semantic reproducibility caused by confusing synonyms in programming.
  • To introduce and validate the Evolvix BEST Names concept for improved naming practices.

Main Methods:

  • Defined C2B interfaces as maps between meaning and naming syntax.
  • Observed naming effects on C2B quality during Evolvix syntax development.
  • Presented and tested the Evolvix BEST (Brief, Explicit, Summarizing, Technical) Names concept.
  • Developed naming questionnaires for C2B debugging.

Main Results:

  • Naming significantly affects C2B quality and semantic reproducibility.
  • Confusing synonyms can degrade biological modeling to deciphering exercises.
  • The Evolvix BEST Names concept demonstrated effectiveness in reducing naming conflicts.
  • Naming questionnaires facilitate C2B debugging.

Conclusions:

  • Improved naming conventions are critical for robust and understandable programming.
  • The Evolvix BEST Names concept offers a structured approach to enhance code clarity and maintainability.
  • Flipped programming language design with BEST Names can lead to innovative software solutions.