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Updated: Mar 10, 2026

Atomic Force Microscopy Investigations of DNA Lesion Recognition in Nucleotide Excision Repair
Published on: May 24, 2017
Timing of DNA lesion recognition: Ubiquitin signaling in the NER pathway
Shalaka Chitale1,2, Holger Richly1
1a Laboratory of Molecular Epigenetics, Institute of Molecular Biology (IMB) , Mainz , Germany.
Abstract:
Damaged DNA is repaired by specialized repair factors that are recruited in a well-orchestrated manner to the damage site. The DNA damage response at UV inflicted DNA lesions is accompanied by posttranslational modifications of DNA repair factors and the chromatin environment sourrounding the lesion. In particular, mono- and poly-ubiquitylation events are an integral part of the DNA damage signaling. Whereas ubiquitin signaling at DNA doublestrand breaks has been subject to intensive studies comparatively little is known about the intricacies of ubiquitylation events occurring during nucleotide excision repair (NER), the major pathway to remove bulky helix lesions. Both, the global genomic (GG-NER) and the transcription-coupled (TC-NER) branches of NER are subject to ubiquitylation and deubiquitylation processes.Here we summarize our current knowledge of the ubiquitylation network that drives DNA repair in the NER pathway and we discuss the crosstalk of ubiquitin signaling with other prominent post-translational modfications that might be essential to time the DNA damage recognition step.
Insights
Ubiquitylation is crucial for DNA repair, particularly in nucleotide excision repair (NER). This review explores the ubiquitylation network in NER and its interplay with other modifications for DNA damage recognition.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- DNA damage triggers specialized repair factors recruited to damage sites.
- Post-translational modifications, including ubiquitylation, are key in DNA damage response.
- Ubiquitylation in DNA double-strand break repair is well-studied, unlike in nucleotide excision repair (NER).
Purpose of the Study:
- To summarize current knowledge of the ubiquitylation network in DNA repair via the NER pathway.
- To discuss the interplay between ubiquitin signaling and other post-translational modifications in NER.
- To elucidate the role of ubiquitylation in timing DNA damage recognition during NER.
Main Methods:
- Literature review of ubiquitylation and DNA repair mechanisms.
- Analysis of post-translational modifications in the context of NER.
- Exploration of signaling pathways involved in DNA damage response.
Main Results:
- Ubiquitylation and deubiquitylation are integral to both global genomic (GG-NER) and transcription-coupled (TC-NER) pathways.
- Specific ubiquitylation events are essential for recruiting repair factors to UV-induced DNA lesions.
- Crosstalk between ubiquitylation and other modifications fine-tunes DNA damage recognition.
Conclusions:
- The ubiquitylation network plays a vital role in orchestrating DNA repair during NER.
- Understanding ubiquitylation in NER is critical for comprehending DNA damage response pathways.
- Further research into the crosstalk of modifications can reveal novel therapeutic targets for DNA repair deficiencies.
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