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Published on: February 28, 2021
A CRISPR/Cas9 Functional Screen Identifies Rare Tumor Suppressors
Alexandra Katigbak1, Regina Cencic1, Francis Robert1
1Department of Biochemistry, McIntyre Medical Sciences Building, McGill University, Montreal, Québec, H3G 1Y6, Canada.
Researchers used genome editing in a mouse cancer model to find rare mutations driving Burkitt's lymphoma. They identified two tumor suppressors that cooperate with MYC to accelerate cancer, highlighting a new method for analyzing tumor mutation data.
Area of Science:
- Oncology
- Genetics
- Cancer Research
Background:
- Vast tumor sequencing data presents challenges in identifying functional consequences of rare mutations.
- Distinguishing driver from passenger mutations is difficult, especially for rare variants.
Purpose of the Study:
- To uncover previously unsuspected rare oncogenic mutations in Burkitt's lymphoma.
- To validate the utility of in vivo CRISPR/Cas9 screens for identifying rare oncogenic modifiers.
Main Methods:
- Combined genome editing technology (CRISPR/Cas9) with a mouse cancer model.
- Conducted in vivo CRISPR/Cas9 screens to analyze tumor mutational data.
Main Results:
- Identified two candidate tumor suppressor genes.
- Demonstrated that the loss of these tumor suppressors cooperates with MYC over-expression to accelerate lymphomagenesis.
Conclusions:
- The study highlights the effectiveness of in vivo CRISPR/Cas9 screens in mouse models for discovering rare oncogenic mutations.
- This approach can identify and validate rare oncogenic modifier events within large tumor sequencing datasets.
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