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Evaluation of Exon Inclusion Induced by Splice Switching Antisense Oligonucleotides in SMA Patient Fibroblasts
Published on: May 11, 2018
Novel splice-switching oligonucleotide promotes BRCA1 aberrant splicing and susceptibility to PARP inhibitor action
Lindsay D Smith1,2, Flávia Leme de Calais1, Michela Raponi1
1Human Development and Health, Faculty of Medicine, University of Southampton, Southampton, UK.
Abstract:
Tumors carrying hereditary mutations in BRCA1, which attenuate the BRCA1 DNA damage repair pathway, are more susceptible to dual treatment with PARP inhibitors and DNA damaging therapeutics. Conversely, breast cancer tumors with nonmutated functional BRCA1 are less sensitive to PARP inhibition. We describe a method that triggers susceptibility to PARP inhibition in BRCA1-functional tumor cells. BRCA1 exon 11 is a key for the function of BRCA1 in DNA damage repair. Analysis of the BRCA1 exon 11 splicing mechanism identified a key region within this exon which, when deleted, induced exon 11 skipping. An RNA splice-switching oligonucleotide (SSO) developed to target this region was shown to artificially stimulate skipping of exon 11 in endogenous BRCA1 pre-mRNA. SSO transfection rendered wild-type BRCA1 expressing cell lines more susceptible to PARP inhibitor treatment, as demonstrated by a reduction in cell survival at all SSO concentrations tested. Combined SSO and PARP inhibitor treatment increased γH2AX expression indicating that SSO-dependent skipping of BRCA1 exon 11 was able to promote DSBs and therefore synthetic lethality. In conclusion, this SSO provides a new potential therapeutic strategy for targeting BRCA1-functional breast cancer by enhancing the effect of PARP inhibitors.
Insights
Researchers developed a novel RNA splice-switching oligonucleotide (SSO) to target BRCA1-functional tumors. This SSO enhances PARP inhibitor effectiveness, offering a new therapeutic strategy for breast cancer by inducing synthetic lethality.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- BRCA1 mutations impair DNA repair, increasing sensitivity to PARP inhibitors.
- BRCA1-functional tumors show limited sensitivity to PARP inhibitors alone.
- Targeting BRCA1-functional tumors is a key challenge in breast cancer therapy.
Purpose of the Study:
- To develop a method to sensitize BRCA1-functional tumor cells to PARP inhibitors.
- To investigate the role of BRCA1 exon 11 splicing in therapeutic response.
- To establish a novel strategy for treating BRCA1-functional breast cancers.
Main Methods:
- Designed an RNA splice-switching oligonucleotide (SSO) to induce skipping of BRCA1 exon 11.
- Transfected SSO into wild-type BRCA1 expressing cell lines.
- Assessed cell survival and DNA damage markers (γH2AX) after combined SSO and PARP inhibitor treatment.
Main Results:
- SSO transfection successfully induced BRCA1 exon 11 skipping.
- SSO treatment sensitized BRCA1-functional cells to PARP inhibitors, reducing cell survival.
- Combined SSO and PARP inhibitor treatment increased double-strand breaks (DSBs), indicating synthetic lethality.
Conclusions:
- SSO-mediated skipping of BRCA1 exon 11 is a viable strategy to enhance PARP inhibitor efficacy.
- This approach offers a potential new therapeutic avenue for BRCA1-functional breast cancer.
- The SSO method can trigger synthetic lethality in tumors with functional BRCA1.
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