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Published on: October 31, 2013
Ionic current modulation from DNA translocation through nanopores under high ionic strength and concentration
Yin Zhang1, Gensheng Wu1, Wei Si1
1Jiangsu Key Laboratory for Design and Fabrication of Micro-Nano Biomedical Instruments, School of Mechanical Engineering, Southeast University, Nanjing 211189, China. yunfeichen@seu.edu.cn.
DNA translocation through nanopores can cause unusual positive or negative ion current changes. This is due to enhanced electroosmotic flow (EOF) under high salt conditions and concentration gradients.
Area of Science:
- Nanopore science
- Biophysics
- Electrochemistry
Background:
- Ion transport through nanopores is crucial for biological processes and technological applications.
- Previous studies primarily focused on low electrolyte concentrations, limiting understanding under physiological or high-concentration conditions.
Purpose of the Study:
- To investigate ionic current modulation during double-stranded DNA (dsDNA) translocation through nanopores under high ionic strength and concentration gradients.
- To explain the mechanisms behind unexpected positive current modulations observed in these conditions.
Main Methods:
- Experimental measurements of ionic current during dsDNA translocation.
- Numerical simulations of ion transport and fluid dynamics.
- Systematic variation of nanopore diameter and electrolyte concentration gradients.
Main Results:
- dsDNA translocation under high ionic strength and concentration gradients can induce both negative and positive ionic current modulations.
- Positive current pulses, contrary to expectations, were observed.
- Enhanced electroosmotic flow (EOF) driven by negatively charged dsDNA was identified as the cause of positive pulses by transporting additional ions.
Conclusions:
- The study reveals complex ion dynamics during dsDNA nanopore translocation under challenging conditions.
- Enhanced EOF plays a significant role in modulating ionic current, leading to positive pulses.
- Findings advance the understanding of nanopore-based sensing and manipulation technologies.
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