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Updated: Mar 9, 2026

Visualizing and Quantifying Endonuclease-Based Site-Specific DNA Damage
Published on: August 21, 2021
Acidic cellular microenvironment modifies carcinogen-induced DNA damage and repair
1Department of Pharmacology and Toxicology, NUTRIM School for Nutrition and Translational Research in Metabolism, Maastricht University, PO Box 616, 6200 MD, Maastricht, The Netherlands.
Chronic inflammation
Area of Science:
- Environmental Science
- Biochemistry
- Molecular Biology
Background:
- Chronic inflammation is linked to cancer development.
- Acidic microenvironments are a hallmark of inflammation.
- The impact of low pH on carcinogen response is not fully understood.
Purpose of the Study:
- To investigate how acidic conditions affect cellular responses to benzo[a]pyrene (B[a]P).
- To examine the influence of extracellular pH (pHe) on B[a]P metabolism, DNA repair, and adduct formation.
Main Methods:
- Human pulmonary epithelial cells (A549, BEAS-2B) were exposed to B[a]P in media with varying pH (7.8 to 5.5).
- B[a]P metabolism, cytochrome P450 activity, DNA repair, and B[a]P-DNA adducts were measured at 6, 24, and 48 hours.
- Intracellular and extracellular pH were monitored throughout the incubations.
Main Results:
- Acidic pH (below 6.0) delayed B[a]P metabolism and reduced cytochrome P450 activity initially.
- DNA repair incision activity was significantly inhibited at low pH.
- After 48 hours, acidic conditions led to higher B[a]P-DNA adduct levels and γ-H2AX foci.
Conclusions:
- Acidic microenvironments delay carcinogen metabolism and impair DNA repair mechanisms.
- This delay and impairment result in increased B[a]P-induced DNA damage.
- The findings highlight the role of pH in modulating cellular responses to environmental carcinogens.
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