Inducible Transposition of a Heat-Activated Retrotransposon in Tissue Culture
Yukari Masuta1, Kosuke Nozawa1, Hiroki Takagi2
1Faculty of Science, Hokkaido University, Sappor, Japan.
Abstract:
A transposition of a heat-activated retrotransposon named ONSEN required compromise of a small RNA-mediated epigenetic regulation that includes RNA-directed DNA methylation (RdDM) machinery after heat treatment. In the current study, we analyzed the transcriptional and transpositional activation of ONSEN to better understand the underlying molecular mechanism involved in the maintenance and/or induction of transposon activation in plant tissue culture. We found the transposition of heat-primed ONSEN during tissue culture independently of RdDM mutation. The heat activation of ONSEN transcripts was not significantly up-regulated in tissue culture compared with that in heat-stressed seedlings, indicating that the transposition of ONSEN was regulated independently of the transcript level. RdDM-related genes were up-regulated by heat stress in both tissue culture and seedlings. The level of DNA methylation of ONSEN did not show any change in tissue culture, and the amount of ONSEN-derived small RNAs was not affected by heat stress. The results indicated that the transposition of ONSEN was regulated by an alternative mechanism in addition to the RdDM-mediated epigenetic regulation in tissue culture. We applied the tissue culture-induced transposition of ONSEN to Japanese radish, an important breeding species of the family Brassicaceae. Several new insertions were detected in a regenerated plant derived from heat-stressed tissues and its self-fertilized progeny, revealing the possibility of molecular breeding without genetic modification.
Insights
Heat stress activates ONSEN retrotransposon transposition in plant tissue culture, independent of RNA-directed DNA methylation (RdDM). This discovery opens avenues for molecular breeding in crops like Japanese radish without genetic modification.
Area of Science:
- Plant molecular biology
- Epigenetics
- Transposable elements
Background:
- Heat stress can activate transposable elements like ONSEN.
- RNA-directed DNA methylation (RdDM) is a key epigenetic mechanism regulating transposons.
- Understanding transposon activation in tissue culture is crucial for plant breeding.
Purpose of the Study:
- Investigate the molecular mechanisms of ONSEN transcriptional and transpositional activation in plant tissue culture.
- Determine the role of RdDM in heat-induced ONSEN transposition during tissue culture.
- Explore the potential of tissue culture-induced ONSEN transposition for molecular breeding.
Main Methods:
- Analysis of ONSEN transcriptional and transpositional activity in heat-stressed plant tissue culture.
- Assessment of RdDM pathway gene expression and DNA methylation levels.
- Detection of ONSEN insertions in regenerated plants and their progeny.
Main Results:
- ONSEN transposition occurred in tissue culture independently of RdDM mutation.
- Heat activation of ONSEN transcripts was not significantly higher in tissue culture than in seedlings.
- RdDM genes were upregulated by heat stress, but ONSEN DNA methylation and small RNA levels remained unaffected.
- Alternative mechanisms regulate ONSEN transposition in tissue culture.
Conclusions:
- ONSEN transposition in plant tissue culture is regulated by a mechanism distinct from RdDM.
- Heat-primed ONSEN transposition in tissue culture offers a novel tool for molecular breeding.
- Application in Japanese radish demonstrates potential for non-GMO breeding strategies.
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