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Employing Digital Droplet PCR to Detect BRAF V600E Mutations in Formalin-fixed Paraffin-embedded Reference Standard Cell Lines
Published on: October 8, 2015
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Expression Profiling of a Human Thyroid Cell Line Stably Expressing the BRAFV600E Mutation
Byoung-Ae Kim1, Hyeon-Gun Jee1, Jin Wook Yi1,2
1Cancer Research Institute, Seoul National University College of Medicine, Seoul, Republic of Korea.
Cancer Genomics & Proteomics
|December 30, 2016
Summary
The BRAFV600E mutation drives papillary thyroid carcinoma (PTC) development. This study created cell lines to reveal how this mutation alters gene expression, impacting cancer cell growth and migration.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The BRAFV600E mutation is a key driver in papillary thyroid carcinoma (PTC) initiation.
- Understanding gene expression changes induced by BRAFV600E is crucial for thyroid cancer research.
Purpose of the Study:
- To investigate the genomic alterations and molecular consequences of the BRAFV600E mutation in thyroid cancer.
- To establish and characterize human thyroid cell lines expressing wild-type (Nthy/WT) and V600E mutant BRAF (Nthy/V600E).
Main Methods:
- Stable transfection of BRAF genes into human thyroid cell lines.
- Functional assays including anchorage-independent growth and Matrigel invasion.
- Microarray analysis for gene expression profiling and Gene Ontology/pathway analysis.
Main Results:
- Stable BRAF gene transfection confirmed by flow cytometry and western blotting.
- Nthy/V600E cells exhibited significantly increased anchorage-independent growth and invasion compared to Nthy/WT cells.
- Microarray analysis identified 2,441 upregulated genes in Nthy/V600E cells, associated with cell adhesion, migration, ERK/MAPK signaling, and cancer pathways.
Conclusions:
- The developed Nthy/WT and Nthy/V600E cell line pair serves as a valuable model for studying BRAFV600E-driven PTC.
- This model facilitates research into the molecular mechanisms underlying BRAFV600E-associated thyroid cancer progression.

