Related Experiment Video
Updated: Mar 9, 2026

Rapid and Refined CD11b Magnetic Isolation of Primary Microglia with Enhanced Purity and Versatility
Published on: April 13, 2017
Dark microglia: Why are they dark?
Kanchan Bisht1, Kaushik Sharma1, Baptiste Lacoste2
1Axe Neurosciences, CRCHU de Québec , Québec City, QC, Canada.
Abstract:
Using transmission electron microscopy (TEM) we recently characterized a microglial phenotype that is induced by chronic stress, fractalkine receptor deficiency, aging, or Alzheimer disease pathology. These 'dark' microglia appear overly active compared with the normal microglia, reaching for synaptic clefts, and extensively engulfing pre-synaptic axon terminals and post-synaptic dendritic spines. From these findings we hypothesized that dark microglia could be specifically implicated in the pathological remodeling of neuronal circuits, which impairs learning, memory, and other essential cognitive functions. In the present addendum we further discuss about the possible causes of their dark appearance under TEM.
Insights
Researchers identified "dark" microglia, a stressed brain cell type, that excessively engulfs neuronal connections. This overactivity may drive cognitive decline in conditions like Alzheimer's disease and aging.
Area of Science:
- Neuroscience
- Cell Biology
- Pathology
Background:
- Microglia, the brain's immune cells, play crucial roles in neuronal health.
- Chronic stress, aging, and neurodegenerative diseases can alter microglial function.
- A distinct microglial phenotype, termed 'dark' microglia, has been observed under Transmission Electron Microscopy (TEM).
Purpose of the Study:
- To characterize the 'dark' microglia phenotype induced by various pathological conditions.
- To investigate the potential role of 'dark' microglia in neuronal circuit remodeling and cognitive impairment.
- To explore the underlying causes of the 'dark' appearance under TEM.
Main Methods:
- Transmission Electron Microscopy (TEM) was used to examine microglial morphology.
- Comparative analysis of microglia from conditions including chronic stress, fractalkine receptor deficiency, aging, and Alzheimer's disease pathology.
- Functional assessment of microglial interaction with synaptic structures.
Main Results:
- 'Dark' microglia exhibit heightened activity compared to normal microglia.
- 'Dark' microglia actively engulf pre-synaptic axon terminals and post-synaptic dendritic spines.
- This engulfment suggests a role in pathological synaptic remodeling.
Conclusions:
- 'Dark' microglia represent an overactive phenotype implicated in neuronal circuit damage.
- This phenotype may contribute to cognitive deficits observed in aging and Alzheimer's disease.
- Further research is needed to fully understand the mechanisms driving 'dark' microglia formation and their precise impact on brain function.

