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Mutations in the Non-Catalytic Subunit Dpb2 of DNA Polymerase Epsilon Affect the Nrm1 Branch of the DNA Replication
Michał Dmowski1, Justyna Rudzka1, Judith L Campbell2
1Institute of Biochemistry and Biophysics, Polish Academy of Sciences Pawińskiego 5a, Warsaw, POLAND.
Abstract:
To preserve genome integrity, the S-phase checkpoint senses damaged DNA or nucleotide depletion and when necessary, arrests replication progression and delays cell division. Previous studies, based on two pol2 mutants have suggested the involvement of DNA polymerase epsilon (Pol ε) in sensing DNA replication accuracy in Saccharomyces cerevisiae. Here we have studied the involvement of Pol ε in sensing proper progression of DNA replication, using a mutant in DPB2, the gene coding for a non-catalytic subunit of Pol ε. Under genotoxic conditions, the dpb2-103 cells progress through S phase faster than wild-type cells. Moreover, the Nrm1-dependent branch of the checkpoint, which regulates the expression of many replication checkpoint genes, is impaired in dpb2-103 cells. Finally, deletion of DDC1 in the dpb2-103 mutant is lethal supporting a model of strand-specific activation of the replication checkpoint. This lethality is suppressed by NRM1 deletion. We postulate that improper activation of the Nrm1-branch may explain inefficient replication checkpoint activation in Pol ε mutants.
Insights
DNA polymerase epsilon (Pol ε) plays a crucial role in sensing DNA replication accuracy. Impaired Pol ε function, specifically in the DPB2 subunit, leads to faster S-phase progression and defects in the replication checkpoint.
Area of Science:
- Cell cycle regulation
- DNA replication
- Genome integrity
Background:
- The S-phase checkpoint is vital for maintaining genome integrity by halting cell division upon detecting DNA damage or nucleotide depletion.
- Previous research implicated DNA polymerase epsilon (Pol ε) in sensing DNA replication accuracy.
- The precise role of Pol ε in monitoring replication progression requires further investigation.
Purpose of the Study:
- To investigate the involvement of DNA polymerase epsilon (Pol ε) in sensing the proper progression of DNA replication.
- To analyze the function of the DPB2 subunit of Pol ε in the context of the S-phase checkpoint.
Main Methods:
- Utilized a mutant in DPB2, a gene encoding a non-catalytic subunit of Pol ε, in Saccharomyces cerevisiae.
- Assessed cell cycle progression under genotoxic conditions.
- Examined the Nrm1-dependent branch of the replication checkpoint.
- Investigated genetic interactions between dpb2-103, DDC1, and NRM1.
Main Results:
- Cells with the dpb2-103 mutation exhibited accelerated S-phase progression compared to wild-type cells under genotoxic stress.
- The Nrm1-dependent regulation of replication checkpoint genes was impaired in dpb2-103 cells.
- Deletion of DDC1 in dpb2-103 cells resulted in lethality, suggesting a role in strand-specific checkpoint activation.
- NRM1 deletion suppressed the lethality observed in dpb2-103 ddc1Δ mutants.
Conclusions:
- Pol ε, through its DPB2 subunit, is essential for efficient activation of the S-phase replication checkpoint.
- Defects in Pol ε function can lead to premature S-phase progression and compromised genome integrity.
- The findings support a model of strand-specific replication checkpoint activation and highlight the importance of the Nrm1-dependent pathway.
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