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Updated: Mar 8, 2026

Comprehensive Workflow of Mass Spectrometry-based Shotgun Proteomics of Tissue Samples
Published on: November 13, 2021
Building ProteomeTools based on a complete synthetic human proteome
Daniel P Zolg1, Mathias Wilhelm1, Karsten Schnatbaum2
1Chair of Proteomics and Bioanalytics, Technical University of Munich, Freising, Germany.
Abstract:
We describe ProteomeTools, a project building molecular and digital tools from the human proteome to facilitate biomedical research. Here we report the generation and multimodal liquid chromatography-tandem mass spectrometry analysis of >330,000 synthetic tryptic peptides representing essentially all canonical human gene products, and we exemplify the utility of these data in several applications. The resource (available at http://www.proteometools.org) will be extended to >1 million peptides, and all data will be shared with the community via ProteomicsDB and ProteomeXchange.
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