Related Experiment Video
Updated: Mar 8, 2026

Isolation of Viral Replication Compartment-enriched Sub-nuclear Fractions from Adenovirus-infected Normal Human Cells
Published on: November 12, 2015
Normal human cell proteins that interact with the adenovirus type 5 E1B 55kDa protein
1Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA.
Abstract:
Several of the functions of the human adenovirus type 5 E1B 55kDa protein are fulfilled via the virus-specific E3 ubiquitin ligase it forms with the viral E4 Orf6 protein and several cellular proteins. Important substrates of this enzyme have not been identified, and other functions, including repression of transcription of interferon-sensitive genes, do not require the ligase. We therefore used immunoaffinity purification and liquid chromatography-mass spectrometry of lysates of normal human cells infected in parallel with HAdV-C5 and E1B 55kDa protein-null mutant viruses to identify specifically E1B 55kDa-associated proteins. The resulting set of >90 E1B-associated proteins contained the great majority identified previously, and was enriched for those associated with the ubiquitin-proteasome system, RNA metabolism and the cell cycle. We also report very severe inhibition of viral genome replication when cells were exposed to both specific or non-specific siRNAs and interferon prior to infection.
Insights
Researchers identified over 90 proteins associated with the human adenovirus type 5 E1B 55kDa protein, revealing new insights into viral infection mechanisms and host cell interactions. This study enhances understanding of adenovirus E1B 55kDa protein functions.
Area of Science:
- Virology
- Molecular Biology
- Immunology
Background:
- The human adenovirus type 5 (HAdV-C5) E1B 55kDa protein plays crucial roles in viral infection, partly through a viral E3 ubiquitin ligase complex.
- However, key substrates of this ligase and functions independent of it remain largely unknown.
Purpose of the Study:
- To identify proteins specifically associated with the HAdV-C5 E1B 55kDa protein.
- To characterize the cellular interactome of the E1B 55kDa protein and understand its role in viral replication and host cell modulation.
Main Methods:
- Immunoaffinity purification of E1B 55kDa-associated proteins from infected human cells.
- Liquid chromatography-mass spectrometry (LC-MS) analysis to identify and quantify bound proteins.
- Infection of cells with wild-type HAdV-C5 and E1B 55kDa protein-null mutant viruses.
Main Results:
- Identification of over 90 E1B 55kDa-associated proteins, including previously known interactors.
- Enrichment of identified proteins in pathways related to the ubiquitin-proteasome system, RNA metabolism, and the cell cycle.
- Demonstration of severe inhibition of viral genome replication upon siRNA and interferon treatment prior to infection.
Conclusions:
- The E1B 55kDa protein interacts with a broad range of cellular proteins involved in fundamental cellular processes.
- These findings provide a comprehensive protein interaction map for the E1B 55kDa protein, aiding in understanding its multifaceted roles during HAdV-C5 infection.
- The study highlights the importance of host-pathogen interactions and potential therapeutic targets in adenovirus infections.
More Related Videos
13:36Utilizing the Antigen Capsid-Incorporation Strategy for the Development of Adenovirus Serotype 5-Vectored Vaccine Approaches
Published on: May 6, 2015
08:14Combined Genetic and Chemical Capsid Modifications of Adenovirus-Based Gene Transfer Vectors for Shielding and Targeting
Published on: October 26, 2018
Related Concept Videos
Cell Adhesion Molecules - Types and Functions
CAM Families
The Integrin family of proteins is primarily involved...
Immunoglobulin-like Cell Adhesion Molecules
Ig-CAMs exhibit either homophilic binding (to other Ig-CAMs) or heterophilic binding (to other ligands such as integrins). While most Ig-CAMs...
Adherens Junctions
Adherens Junctions are Dynamic
Integrins
Some ECM proteins assemble into a basement membrane to which the remaining components adhere. Proteoglycans typically form the bulk of the ECM while fibrous proteins, like collagen,...
Structure of Cadherins