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Published on: May 8, 2017
Changes in the respiratory microbiome during acute exacerbations of idiopathic pulmonary fibrosis
Philip L Molyneaux1,2, Michael J Cox1, Athol U Wells2
1National Heart and Lung Institute, Imperial College, London, UK.
Abstract:
Acute exacerbations of idiopathic pulmonary fibrosis (AE-IPF) have been defined as events of clinically significant respiratory deterioration with an unidentifiable cause. They carry a significant mortality and morbidity and while their exact pathogenesis remains unclear, the possibility remains that hidden infection may play a role. The aim of this pilot study was to determine whether changes in the respiratory microbiota occur during an AE-IPF. Bacterial DNA was extracted from bronchoalveolar lavage from patients with stable IPF and those experiencing an AE-IPF. A hyper-variable region of the 16S ribosomal RNA gene (16S rRNA) was amplified, quantified and pyrosequenced. Culture independent techniques demonstrate AE-IPF is associated with an increased BAL bacterial burden compared to stable disease and highlight shifts in the composition of the respiratory microbiota during an AE-IPF.
Insights
Acute exacerbations of idiopathic pulmonary fibrosis (AE-IPF) involve respiratory decline. This study found increased bacteria and altered respiratory microbiota during AE-IPF events, suggesting infection may play a role.
Area of Science:
- Pulmonary Medicine
- Microbiology
- Genetics
Background:
- Idiopathic pulmonary fibrosis (IPF) is a progressive lung disease with a poor prognosis.
- Acute exacerbations of IPF (AE-IPF) are characterized by sudden respiratory deterioration with unknown causes.
- The role of respiratory infections in AE-IPF pathogenesis is not fully understood.
Discussion:
- This pilot study investigated the respiratory microbiota in patients with stable IPF versus those experiencing AE-IPF.
- Bacterial DNA from bronchoalveolar lavage (BAL) was analyzed using 16S rRNA gene pyrosequencing.
- Culture-independent techniques were employed to assess bacterial burden and composition.
Key Insights:
- Patients with AE-IPF exhibited a significantly higher bacterial load in their BAL fluid compared to stable IPF patients.
- Significant shifts in the composition of the respiratory microbiota were observed during AE-IPF events.
- These findings suggest that alterations in the respiratory microbiome may be associated with AE-IPF.
Outlook:
- Further research is warranted to elucidate the specific role of bacterial infections and microbiota changes in AE-IPF.
- Investigating potential therapeutic strategies targeting the respiratory microbiota could be beneficial for managing AE-IPF.
- This study provides a foundation for future investigations into the complex interplay between IPF, exacerbations, and the lung microbiome.
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