Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Transgenic Plants02:50

Transgenic Plants

8.9K
Recombinant DNA technology called transgenesis is often used to add a foreign gene or remove a detrimental gene from an organism. Such genetically modified organisms are called transgenic organisms.
The first-ever transgenic plant was a tobacco plant developed in 1983 that showed resistance against the tobacco mosaic virus. Since then, many transgenic plants have been developed and commercialized for improving the agricultural, ornamental, and horticultural value of a crop plant. Transgenic...
8.9K
Plant Breeding and Biotechnology01:59

Plant Breeding and Biotechnology

22.0K
Crop cultivation has a long history in human civilization, with records showing the cultivation of cereal plants beginning at around 8000 BC. This early plant breeding was developed primarily to provide a steady supply of food.
22.0K
What is Gene Expression?01:42

What is Gene Expression?

198.2K
Overview
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
198.2K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Serum cytokine profiling reveals distinct inflammatory signatures in Kawasaki disease and MIS-C and suggests associations with coronary artery lesions.

Pediatric research·2026
Same author

Erratum: Partially hydrolyzed guar gum attenuates symptoms and modulates the gut microbiota in a model of SARS-CoV-2 infection - CORRIGENDUM.

Gut microbiome (Cambridge, England)·2026
Same author

Right atrial infective endocarditis originating from superior vena cava thrombophlebitis related to a dialysis catheter monitored using transthoracic echocardiography.

Journal of medical ultrasonics (2001)·2026
Same author

Clinical Contexts of Detection of Benign Transient Hyperphosphatasemia in Infants and Young Children: A Single-Center Retrospective Study.

Cureus·2026
Same author

A Non-Fetal Chronic Residual Inflammatory Liver Phenotype After Transient Abnormal Myelopoiesis in Down Syndrome.

Pediatric blood & cancer·2026
Same author

Rapidly Progressive Kidney Failure With Transient Non-Cystic Kidney Enlargement: A Case Report Highlighting Delayed Medullary Cyst Formation.

Nephrology (Carlton, Vic.)·2026

Related Experiment Video

Updated: Mar 8, 2026

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics
08:09

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics

Published on: June 17, 2012

20.6K

PlantExpress: A Database Integrating OryzaExpress and ArthaExpress for Single-species and Cross-species Gene

Toru Kudo1, Shin Terashima1, Yuno Takaki1

  • 1Bioinformatics Laboratory, School of Agriculture, Meiji University, Higashi-mita, Tama-ku, Kawasaki, Kanagawa, Japan.

Plant & Cell Physiology
|February 4, 2017
PubMed
Summary

PlantExpress is a new web database for analyzing plant gene expression networks using public microarray data from rice and Arabidopsis. It enables both single-species and cross-species comparative analyses to understand gene functions.

Keywords:
Arabidopsis thalianaGene expression networkMicroarrayOryza sativa (rice)

More Related Videos

Obtaining High-Quality Transcriptome Data from Cereal Seeds by a Modified Method for Gene Expression Profiling
07:18

Obtaining High-Quality Transcriptome Data from Cereal Seeds by a Modified Method for Gene Expression Profiling

Published on: May 21, 2020

8.0K
Comprehensive Workflow for the Genome-wide Identification and Expression Meta-analysis of the ATL E3 Ubiquitin Ligase Gene Family in Grapevine
10:40

Comprehensive Workflow for the Genome-wide Identification and Expression Meta-analysis of the ATL E3 Ubiquitin Ligase Gene Family in Grapevine

Published on: December 22, 2017

11.0K

Related Experiment Videos

Last Updated: Mar 8, 2026

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics
08:09

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics

Published on: June 17, 2012

20.6K
Obtaining High-Quality Transcriptome Data from Cereal Seeds by a Modified Method for Gene Expression Profiling
07:18

Obtaining High-Quality Transcriptome Data from Cereal Seeds by a Modified Method for Gene Expression Profiling

Published on: May 21, 2020

8.0K
Comprehensive Workflow for the Genome-wide Identification and Expression Meta-analysis of the ATL E3 Ubiquitin Ligase Gene Family in Grapevine
10:40

Comprehensive Workflow for the Genome-wide Identification and Expression Meta-analysis of the ATL E3 Ubiquitin Ligase Gene Family in Grapevine

Published on: December 22, 2017

11.0K

Area of Science:

  • Plant biology
  • Bioinformatics
  • Genomics

Background:

  • Publicly available microarray data for plants, especially rice and Arabidopsis, offer extensive sample variation.
  • Gene expression network (GEN) analysis is crucial for understanding plant gene functions.

Purpose of the Study:

  • Introduce PlantExpress, a web database for GEN analysis using public plant microarray data.
  • Provide tools for both single-species and cross-species comparative GEN analysis.

Main Methods:

  • Developed PlantExpress with single-species modes (OryzaExpress for rice, ArthaExpress for Arabidopsis) and a cross-species mode.
  • Integrated data from Affymetrix Rice Genome Array, Agilent Rice Gene Expression 4x44K Microarray, and Affymetrix Arabidopsis ATH1 Genome Array.
  • Implemented a 'MyList' function for saving gene/sample lists and direct export to the PODC database.

Main Results:

  • PlantExpress offers comprehensive GEN analysis for rice and Arabidopsis.
  • The database integrates a large number of samples from multiple microarray platforms.
  • The 'MyList' function facilitates customized analyses and data sharing with other databases like PODC.

Conclusions:

  • PlantExpress enhances the utility of public plant microarray data for gene expression network analysis.
  • The platform supports comparative genomics between rice and Arabidopsis.
  • Facilitates deeper understanding of plant gene biological functions.