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Published on: July 14, 2016
Familial amyloid polyneuropathy in Portugal: New genes modulating age-at-onset
Diana Santos1, Teresa Coelho2, Miguel Alves-Ferreira1
1i3S Instituto de Investigação e Inovação em Saúde Universidade do Porto Porto Portugal; UnIGENeIBMC - Institute for Molecular and Cell Biology Universidade do Porto Porto Portugal; ICBAS Instituto Ciências Biomédicas Abel Salazar Universidade do Porto Porto Portugal.
Objectives:
Familial amyloid polyneuropathy (FAP ATTRV30M) shows a wide variation in age-at-onset (AO) between clusters, families, and among generations. We will now explore some candidate genes involved in altered disease pathways in order to assess their role as genetic modifiers of AO, using a family-centered approach.
Methods:
We analyzed 62 tagging SNPs from nine genes-NGAL,MMP-9,BGN,MEK1,MEK2,ERK1,ERK2,HSP27, and YWHAZ - in a sample of 318 V30M Portuguese patients (106 families), currently under follow-up. A generalized estimating equation analysis was used to take into account nonindependency of AO between relatives. Also, an in silico analysis was performed in order to assess the functional impact of significant variants associated with AO.
Results:
We found for the first time variants from six genes (NGAL,BGN (in the female group), MEK1,MEK2,HSP27, and YWHAZ) that were significantly associated with early- and/or late-onset. Then, we confirmed a strong synergistic interaction between NGAL and MMP-9 genes. Additionally, by an in silico analysis, we found some variants for MEK1 gene that may alter binding of the transcription factors and that influence the regulation of gene expression regarding microRNA binding sites and splicing regulatory factors.
Interpretation:
These findings showed that different genetic factors can modulate differently the onset of disease's symptoms and revealed new mechanisms with clinical implications in the genetic counseling and follow-up of mutation carriers and could contribute for development of potential therapeutical targets.
Insights
Genetic factors significantly influence the age of onset for Familial Amyloid Polyneuropathy (FAP ATTRV30M). This study identified key genes and interactions that modify disease progression, offering insights for genetic counseling and potential therapies.
Area of Science:
- Genetics
- Neurology
- Molecular Biology
Background:
- Familial Amyloid Polyneuropathy (FAP ATTRV30M) exhibits considerable variability in age-at-onset (AO) across different populations, families, and generations.
- Understanding the genetic underpinnings of this variability is crucial for predicting disease course and developing targeted interventions.
Purpose of the Study:
- To investigate candidate genes as potential genetic modifiers of AO in FAP ATTRV30M.
- To employ a family-centered approach to analyze the influence of genetic variants on disease onset.
Main Methods:
- Analysis of 62 tagging SNPs from nine candidate genes (NGAL, MMP-9, BGN, MEK1, MEK2, ERK1, ERK2, HSP27, YWHAZ) in 318 Portuguese FAP ATTRV30M patients from 106 families.
- Utilized generalized estimating equation analysis to account for non-independent AO data within families.
- Performed in silico analysis to assess the functional impact of significant genetic variants on AO.
Main Results:
- Identified significant associations between variants in six genes (NGAL, BGN, MEK1, MEK2, HSP27, YWHAZ) and early/late onset of FAP ATTRV30M.
- Confirmed a strong synergistic interaction between NGAL and MMP-9 genes in modulating disease onset.
- In silico analysis revealed potential functional impacts of MEK1 variants on gene expression regulation, including transcription factor binding, microRNA sites, and splicing factors.
Conclusions:
- Genetic factors play a significant role in modulating the age of symptom onset in FAP ATTRV30M.
- The identified genetic modifiers and interactions provide new insights into disease mechanisms.
- Findings have clinical implications for genetic counseling, patient follow-up, and the development of novel therapeutic targets for FAP ATTRV30M.
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