Related Experiment Video
Updated: Jun 12, 2026

Generation of Genomic Deletions in Mammalian Cell Lines via CRISPR/Cas9
Published on: January 3, 2015
CRISPR/Cas9-Mediated Generation of Niemann-Pick C1 Knockout Cell Line
Ximing Du1, Ivan Lukmantara1, Hongyuan Yang2
1School of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, NSW, 2052, Australia.
Abstract:
Generating a cholesterol storage phenotype of Niemann-Pick Type C (NPC) disease is important for investigating the mechanisms of intracellular cholesterol trafficking, as well as screening drugs for potential treatment of NPC disease. The use of the CRISPR/Cas9 technology to knockout specific genes within the genome of mammals has become routine in the past few years. Here, we describe a protocol for producing a cellular NPC cholesterol storage phenotype in HeLa cells using the CRISPR-Cas9 system to disrupt the NPC1 gene. The protocol details the steps for single guide RNA oligo cloning, cell colony selection, and cell line verification by filipin staining and immunoblotting.
Insights
Researchers developed a CRISPR/Cas9 method to create a Niemann-Pick Type C (NPC) cellular model. This technique disrupts the NPC1 gene in HeLa cells, enabling cholesterol metabolism studies and drug screening for NPC disease.
Area of Science:
- Cell Biology
- Genetics
- Molecular Biology
Background:
- Niemann-Pick Type C (NPC) disease is characterized by intracellular cholesterol accumulation.
- Understanding cholesterol trafficking is crucial for NPC disease research and therapeutic development.
- CRISPR/Cas9 gene editing technology offers precise genetic manipulation capabilities.
Purpose of the Study:
- To establish a reliable protocol for generating a cellular model of NPC disease.
- To utilize CRISPR/Cas9 technology to disrupt the NPC1 gene in HeLa cells.
- To create a cellular phenotype mimicking NPC disease for research and drug screening.
Main Methods:
- CRISPR/Cas9 system employed for targeted gene disruption.
- NPC1 gene knockout in HeLa cells using single guide RNA (sgRNA) oligo cloning.
- Cell colony selection and isolation of genetically modified cells.
- Verification of the NPC phenotype through filipin staining and immunoblotting.
Main Results:
- Successful disruption of the NPC1 gene in HeLa cells using CRISPR/Cas9.
- Generation of a cellular phenotype exhibiting cholesterol storage, characteristic of NPC disease.
- Validated the protocol's efficacy in creating a reliable cellular model.
Conclusions:
- The described protocol effectively generates a cellular NPC cholesterol storage phenotype using CRISPR/Cas9.
- This method provides a valuable tool for investigating NPC disease mechanisms.
- The established cell line is suitable for high-throughput drug screening and therapeutic development for NPC disease.
Related Concept Videos
CRISPR
CRISPR/Cas9 Genome Editing

