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Updated: Mar 7, 2026

Purification of Ubiquitinated p53 Proteins from Mammalian Cells
Published on: March 21, 2022
Ovarian tumor domain-containing protein 1 deubiquitinates and stabilizes p53
Shudong Piao1, Han Zhong Pei1, Bin Huang1
1Department of Biochemistry and Molecular Biology, College of Medicine, Yeungnam University, South Korea.
Abstract:
Ubiquitination and deubiquitination pathways play important roles in the regulation of p53 stability and activity. p53 is ubiquitinated and destabilized by E3 ubiquitin ligases and is deubiquitinated and stabilized by deubiquitinases (DUBs). We screened ovarian tumor (OTU) subfamily proteins to identify novel DUBs that stabilized p53. OTU domain-containing protein 1 (OTUD1) is a DUB belonging to the OTU family; however, its substrates and its role in cells are unknown. Here, we used an overexpression and knockdown system to show that OTUD1 is a novel regulator of p53 stability. OTUD1 overexpression increased p53 stability, whereas OTUD1 knockdown decreased p53 stability. Moreover, we observed that OTUD1 directly interacted with p53. Our results showed that OTUD1 deubiquitinated p53 and that functional OTUD1 was required for p53 stabilization. The deubiquitination activity of OTUD1 was necessary for p53 stabilization, as confirmed using an inactive OTUD1 mutant (C320S OTUD1 mutant). We also found that wild-type OTUD1 upregulated p21 and Mdm2 expression but inactive OTUD1 mutant did not. Furthermore, OTUD1 significantly suppressed colony formation. Next, we confirmed that OTUD1 overexpression increased the cleavage of caspase-3 and PARP and subsequently increased apoptosis. Together, these results suggest that OTUD1 is a novel regulator of p53 stability and activity.
Insights
OTU domain-containing protein 1 (OTUD1) deubiquitinates and stabilizes p53, a key tumor suppressor. This novel regulator enhances p53 activity, suppresses tumor growth, and promotes apoptosis, offering new therapeutic avenues.
Area of Science:
- Molecular Biology
- Cancer Research
- Protein Biochemistry
Background:
- Ubiquitination and deubiquitination are critical for regulating p53 protein stability and activity.
- Deubiquitinases (DUBs) stabilize p53, while E3 ubiquitin ligases destabilize it.
- The role of OTU domain-containing protein 1 (OTUD1) in p53 regulation was previously unknown.
Purpose of the Study:
- To identify novel deubiquitinases (DUBs) that stabilize p53.
- To investigate the role of OTU domain-containing protein 1 (OTUD1) in p53 stability and activity.
Main Methods:
- Screening of ovarian tumor (OTU) subfamily proteins.
- Overexpression and knockdown systems in cells.
- Co-immunoprecipitation to assess protein interactions.
- Analysis of p53 target gene expression (p21, Mdm2).
- Colony formation assays.
- Apoptosis assays (caspase-3 and PARP cleavage).
Main Results:
- OTUD1 was identified as a novel DUB that directly interacts with and deubiquitinates p53.
- OTUD1 overexpression increased p53 stability and activity, while OTUD1 knockdown decreased them.
- Functional OTUD1, but not an inactive mutant, stabilized p53, upregulated p21 and Mdm2, suppressed colony formation, and induced apoptosis.
- OTUD1's deubiquitinating activity is essential for p53 stabilization.
Conclusions:
- OTUD1 is a novel regulator of p53 stability and activity.
- OTUD1 functions as a DUB to stabilize p53, thereby suppressing tumor cell proliferation and promoting apoptosis.
- OTUD1 represents a potential therapeutic target in cancer treatment.
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