Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

7.1K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
7.1K
Genome Annotation and Assembly03:36

Genome Annotation and Assembly

21.3K
The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
21.3K
Plant Breeding and Biotechnology01:59

Plant Breeding and Biotechnology

22.0K
Crop cultivation has a long history in human civilization, with records showing the cultivation of cereal plants beginning at around 8000 BC. This early plant breeding was developed primarily to provide a steady supply of food.
22.0K
Genomics02:02

Genomics

41.2K
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
41.2K
Transgenic Plants02:50

Transgenic Plants

8.9K
Recombinant DNA technology called transgenesis is often used to add a foreign gene or remove a detrimental gene from an organism. Such genetically modified organisms are called transgenic organisms.
The first-ever transgenic plant was a tobacco plant developed in 1983 that showed resistance against the tobacco mosaic virus. Since then, many transgenic plants have been developed and commercialized for improving the agricultural, ornamental, and horticultural value of a crop plant. Transgenic...
8.9K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Kinetico-Mechanistic Study of the Chemical Redox Cycling of Cubic PBA {M<sup>+</sup>} ⊂ (Co<sup>III</sup><sub>4</sub>/Fe<sup>II</sup><sub>4</sub>) Structures.

Inorganic chemistry·2026
Same author

Molecular interactions between plants and arthropod herbivores in the context of climate change.

Journal of experimental botany·2025
Same author

Synthetic bakuchiol derivatives: ester and ether analogs with activity against clinically important bacteria.

Frontiers in pharmacology·2025
Same author

Kinetico-mechanistic insights into the photodynamic process of Au<sup>I</sup> complexes with the CNC<sub>6</sub>H<sub>4</sub>NNC<sub>6</sub>H<sub>5</sub> (iso-Ph) azobenzene ligand.

Dalton transactions (Cambridge, England : 2003)·2025
Same author

The role of plant cell walls in pest resistance: current insights and future perspectives.

Journal of experimental botany·2025
Same author

Focus issue introduction: 3D image acquisition and display: technology, perception and applications.

Optics express·2025
Same journal

RNA Modifications as Drug Targets: Unlocking the Therapeutic Potential of the Epitranscriptome.

Current genomics·2026
Same journal

AgriBioNER: A Named Entity Recognition Tool for Identification of ncRNA and Diseases in Agricultural Literature.

Current genomics·2026
Same journal

Understanding the Evolutionary Adaptations and the Associated Functional Dynamics of Diatom <i>Cyclotella Cryptica</i>: A Chloroplast Genome-wide Comparative Study.

Current genomics·2026
Same journal

The Role of Collagen Genetic Variability in Degenerative Disc Disease and Related Conditions.

Current genomics·2026
Same journal

Genomics-Driven Immunotherapy: Advancing Cancer Treatment through Personalized Approaches.

Current genomics·2026
Same journal

Innovative Applications and Challenges of Isothermal Amplification Technology in miRNA Detection.

Current genomics·2026
See all related articles

Related Experiment Video

Updated: Mar 7, 2026

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics
08:09

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics

Published on: June 17, 2012

20.6K

Computational Tools for Genomic Studies in Plants.

Manuel Martinez1

  • 1Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid, Campus Montegancedo, 28223-Pozuelo de Alarcón, Madrid, Spain.

Current Genomics
|February 21, 2017
PubMed
Summary
This summary is machine-generated.

This review surveys plant genomic databases and computational tools for comparative genomics. It highlights emerging bioinformatics approaches for efficient plant genome analysis in future research.

Keywords:
Comparative genomicsComputational toolsGenome databasesGenome projectsPlants.

More Related Videos

Ice-Cap: A Method for Growing Arabidopsis and Tomato Plants in 96-well Plates for High-Throughput Genotyping
11:15

Ice-Cap: A Method for Growing Arabidopsis and Tomato Plants in 96-well Plates for High-Throughput Genotyping

Published on: November 9, 2011

23.4K
A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants
06:34

A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants

Published on: January 21, 2020

8.9K

Related Experiment Videos

Last Updated: Mar 7, 2026

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics
08:09

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics

Published on: June 17, 2012

20.6K
Ice-Cap: A Method for Growing Arabidopsis and Tomato Plants in 96-well Plates for High-Throughput Genotyping
11:15

Ice-Cap: A Method for Growing Arabidopsis and Tomato Plants in 96-well Plates for High-Throughput Genotyping

Published on: November 9, 2011

23.4K
A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants
06:34

A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants

Published on: January 21, 2020

8.9K

Area of Science:

  • Genomics
  • Bioinformatics
  • Computational Biology

Background:

  • Numerous plant genomes, including major crops, have been sequenced recently.
  • Computational tools are essential for managing and analyzing this vast amount of genomic data.
  • Databases play a crucial role in hosting and organizing plant genomic information.

Purpose of the Study:

  • To review existing databases for plant genome projects, species-specific projects, and comparative genomics.
  • To analyze the computational tools used in plant comparative genomics databases.
  • To discuss future computational approaches for plant genome analysis.

Main Methods:

  • Mini-review of literature on plant genomic databases.
  • Comparative analysis of computational tools within these databases.
  • Discussion of emerging high-performance bioinformatics tools for plant research.

Main Results:

  • Identification of various databases for plant genome projects and comparative genomics.
  • In-depth analysis of common and specific computational tools across different databases.
  • Commentary on advanced bioinformatics tools tailored for plant genomics.

Conclusions:

  • The landscape of plant genomic databases and associated computational tools is diverse and evolving.
  • Comparative genomics relies on specialized tools, with ongoing development in high-performance bioinformatics.
  • Future research requires efficient computational strategies for analyzing large-scale plant genome data.