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Characterisation of the first KPC-2-producing Klebsiella pneumoniae ST340 from Peru
Gertrudis Horna1, Jorge Velasquez2, Nathaly Fernández2
1ISGlobal, Barcelona Centre for International Health Research (CRESIB), Hospital Clínic - Universitat de Barcelona, Barcelona, Spain; Universidad Peruana Cayetano Heredia, Av. Honorio Delgado N.° 430, San Martín de Porras, Lima 31, Peru.
Objectives:
The aim of this study was to characterise a KPC-carrying Klebsiella pneumoniae isolate from a Peruvian hospital setting.
Methods:
The identity of the isolate was confirmed by amplification and sequencing of the 16S rRNA gene, and the antibiotic resistance profile was determined by disk diffusion and automated methods The sequence type (ST) and phylogenetic group were established by PCR. The presence of different β-lactamase genes was determined, including blaMBL, blaKPC, blaCTX-M, blaSHV, blaOXA-1-like, blaOXA-2-like, blaOXA-5-like, blaOXA-48-like and blaTEM and up to six different plasmid-encoded AmpC genes as well as class 1 integrons. The conjugability of β-lactam resistance was assessed by conjugation.
Results:
The isolate was confirmed to be K. pneumoniae classified as belonging to the KpI phylogenetic group within ST340, which belongs to the high-risk clonal complex 258 (CC258). The isolate was resistant to all β-lactam agents tested, with only the presence of a non-conjugative blaKPC-2 gene being detected and carried in a non-classical genetic structure.
Conclusions:
This is the first description of a member of CC258 and of a blaKPC-2 gene in Peru. Intensive surveillance is needed to determine the relevance of both in this area.
Insights
This study identified a carbapenem-resistant Klebsiella pneumoniae isolate in Peru, carrying the KPC-2 gene within the high-risk CC258 clonal complex. Further surveillance is crucial to understand its prevalence and impact in the region.
Area of Science:
- Microbiology
- Genetics
- Infectious Diseases
Background:
- Klebsiella pneumoniae is a significant nosocomial pathogen.
- Carbapenem resistance, particularly due to KPC enzymes, is a growing global health concern.
- The high-risk clonal complex 258 (CC258) is associated with the spread of carbapenem resistance.
Purpose of the Study:
- To characterize a Klebsiella pneumoniae isolate carrying a KPC gene from a Peruvian hospital.
- To determine the genetic features and antibiotic resistance profile of the isolate.
- To assess the presence and potential spread of CC258 and KPC-2 in Peru.
Main Methods:
- 16S rRNA gene sequencing for isolate identification.
- Antibiotic resistance profiling using disk diffusion and automated methods.
- PCR for sequence type, phylogenetic group, and beta-lactamase gene determination (including blaKPC, blaMBL, blaCTX-M, blaSHV, blaOXA, blaTEM).
- Assessment of plasmid-encoded AmpC genes and class 1 integrons.
- Conjugation assays to evaluate beta-lactam resistance transfer.
Main Results:
- The isolate was confirmed as Klebsiella pneumoniae belonging to phylogenetic group KpI and sequence type ST340, a member of CC258.
- The isolate exhibited resistance to all tested beta-lactam antibiotics.
- A non-conjugative blaKPC-2 gene was detected, located within a non-classical genetic structure.
Conclusions:
- This marks the first report of CC258 and a blaKPC-2 gene in Peru.
- The findings highlight the emergence of carbapenem-resistant Klebsiella pneumoniae in Peru.
- Intensive surveillance is recommended to ascertain the significance of CC258 and blaKPC-2 in the Peruvian healthcare setting.
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