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Updated: Mar 6, 2026

Evaluation of Substrate Ubiquitylation by E3 Ubiquitin-ligase in Mammalian Cell Lysates
Published on: May 10, 2022
Substrate specificity of TOR complex 2 is determined by a ubiquitin-fold domain of the Sin1 subunit
Hisashi Tatebe1, Shinichi Murayama1, Toshiya Yonekura1
1Graduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, Japan.
Abstract:
The target of rapamycin (TOR) protein kinase forms multi-subunit TOR complex 1 (TORC1) and TOR complex 2 (TORC2), which exhibit distinct substrate specificities. Sin1 is one of the TORC2-specific subunit essential for phosphorylation and activation of certain AGC-family kinases. Here, we show that Sin1 is dispensable for the catalytic activity of TORC2, but its conserved region in the middle (Sin1CRIM) forms a discrete domain that specifically binds the TORC2 substrate kinases. Sin1CRIM fused to a different TORC2 subunit can recruit the TORC2 substrate Gad8 for phosphorylation even in the sin1 null mutant of fission yeast. The solution structure of Sin1CRIM shows a ubiquitin-like fold with a characteristic acidic loop, which is essential for interaction with the TORC2 substrates. The specific substrate-recognition function is conserved in human Sin1CRIM, which may represent a potential target for novel anticancer drugs that prevent activation of the mTORC2 substrates such as AKT.
Insights
The Sin1 protein
Area of Science:
- Molecular Biology
- Cell Signaling
- Biochemistry
Background:
- The target of rapamycin (TOR) protein kinase forms TOR complex 1 (TORC1) and TOR complex 2 (TORC2).
- Sin1 is a subunit specific to TORC2, crucial for activating AGC-family kinases.
- TORC2 regulates diverse cellular processes through substrate phosphorylation.
Purpose of the Study:
- To investigate the role of Sin1 in TORC2 function and substrate recognition.
- To determine the structural basis for Sin1's interaction with TORC2 substrates.
- To explore the therapeutic potential of Sin1 in cancer treatment.
Main Methods:
- Genetic manipulation in fission yeast (sin1 null mutant).
- Protein domain engineering (Sin1CRIM fusion).
- Solution structure determination of Sin1CRIM.
- Biochemical assays for kinase activity and substrate binding.
Main Results:
- Sin1 is not essential for TORC2 catalytic activity but mediates substrate binding.
- The Sin1 conserved region in the middle (Sin1CRIM) specifically binds TORC2 substrate kinases.
- Sin1CRIM can recruit the substrate Gad8 for phosphorylation independently of full-length Sin1.
- Sin1CRIM possesses a ubiquitin-like fold with an acidic loop critical for substrate interaction.
- Human Sin1CRIM exhibits conserved substrate-recognition function.
Conclusions:
- Sin1 acts as a substrate-recognition module within TORC2.
- The Sin1CRIM domain is a key determinant of TORC2 substrate specificity.
- Sin1CRIM's conserved function suggests it as a potential drug target for modulating mTORC2 activity, particularly in cancer therapy.
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