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Activity Based Protein Profiling Leads to Identification of Novel Protein Targets for Nerve Agent VX
Dan Carmany1, Andrew J Walz2, Fu-Lian Hsu2
1Excet, Inc. , 6225 Brandon Avenue, Suite 360, Springfield, Virginia 22150, United States.
Abstract:
Organophosphorus (OP) nerve agents continue to be a threat at home and abroad during the war against terrorism. Human exposure to nerve agents such as VX results in a cascade of toxic effects relative to the exposure level including ocular miosis, excessive secretions, convulsions, seizures, and death. The primary mechanism behind these overt symptoms is the disruption of cholinergic pathways. While much is known about the primary toxicity mechanisms of nerve agents, there remains a paucity of information regarding impacts on other pathways and systemic effects. These are important for establishing a comprehensive understanding of the toxic mechanisms of OP nerve agents. To identify novel proteins that interact with VX, and that may give insight into these other mechanisms, we used activity-based protein profiling (ABPP) employing a novel VX-probe on lysates from rat heart, liver, kidney, diaphragm, and brain tissue. By making use of a biotin linked VX-probe, proteins covalently bound by the probe were isolated and enriched using streptavidin beads. The proteins were then digested, labeled with isobarically distinct tandem mass tag (TMT) labels, and analyzed by liquid chromatography tandem mass spectrometry (LC-MS/MS). Quantitative analysis identified 132 bound proteins, with many proteins found in multiple tissues. As with previously published ABPP OP work, monoacylglycerol lipase associated proteins and fatty acid amide hydrolase (FAAH) were shown to be targets of VX. In addition to these two and other predicted neurotransmitter-related proteins, a number of proteins involved with energy metabolism were identified. Four of these enzymes, mitochondrial isocitrate dehydrogenase 2 (IDH2), isocitrate dehydrogenase 3 (IDH3), malate dehydrogenase (MDH), and succinyl CoA (SCS) ligase, were assayed for VX inhibition. Only IDH2 NADP+ activity was shown to be inhibited directly. This result is consistent with other work reporting animals exposed to OP compounds exhibit reduced IDH activity. Though clearly a secondary mechanism for toxicity, this is the first time VX has been shown to directly interfere with energy metabolism. Taken together, the ABPP work described here suggests the discovery of novel protein-agent interactions, which could be useful for the development of novel diagnostics or potential adjuvant therapeutics.
Insights
Organophosphorus nerve agents like VX disrupt the nervous system. This study used a novel probe to identify new VX-interacting proteins, revealing VX directly impacts energy metabolism by inhibiting IDH2.
Area of Science:
- Biochemistry
- Toxicology
- Proteomics
Background:
- Organophosphorus (OP) nerve agents, such as VX, pose significant threats, primarily acting by disrupting cholinergic pathways.
- While primary toxicity mechanisms are known, systemic effects and impacts on other biological pathways remain underexplored.
- Understanding these secondary effects is crucial for a comprehensive grasp of OP nerve agent toxicity.
Purpose of the Study:
- To identify novel proteins interacting with the VX nerve agent using activity-based protein profiling (ABPP).
- To gain insights into potential secondary mechanisms of VX toxicity beyond cholinergic disruption.
- To explore VX interactions in various rat tissues, including heart, liver, kidney, diaphragm, and brain.
Main Methods:
- Utilized a novel biotin-linked VX-probe for activity-based protein profiling (ABPP) on rat tissue lysates.
- Isolated and enriched VX-bound proteins using streptavidin beads.
- Identified and quantified proteins via liquid chromatography tandem mass spectrometry (LC-MS/MS) after TMT labeling.
Main Results:
- Identified 132 VX-bound proteins across multiple tissues, including known targets like monoacylglycerol lipase and fatty acid amide hydrolase (FAAH).
- Discovered several proteins involved in energy metabolism, notably mitochondrial isocitrate dehydrogenase 2 (IDH2), isocitrate dehydrogenase 3 (IDH3), malate dehydrogenase (MDH), and succinyl CoA (SCS) ligase.
- Demonstrated direct inhibition of IDH2 NADP+ activity by VX, indicating a novel interference with cellular energy metabolism.
Conclusions:
- The study identified novel protein-VX interactions, expanding the understanding of VX toxicity mechanisms.
- VX directly interferes with energy metabolism through inhibition of IDH2, representing a secondary toxicity pathway.
- These findings could inform the development of novel diagnostics and adjuvant therapeutics for nerve agent exposure.
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