Controlling testing volume for respiratory viruses using machine learning and text mining
Mark V Mai1, Michael Krauthammer2
1The Children's Hospital of Philadelphia, Philadelphia, PA.
Insights
Machine learning models using electronic health record data can identify pediatric inpatients unlikely to have viral respiratory infections, potentially reducing unnecessary viral testing and associated costs.
Area of Science:
- Pediatric Infectious Diseases
- Medical Informatics
- Health Services Research
Background:
- Viral testing for pediatric respiratory infections is frequent and costly.
- Identifying children who do not require broad viral testing can optimize resource allocation.
Purpose of the Study:
- To develop predictive models using admission data to identify pediatric inpatients with a low probability of viral respiratory infections.
- To assess the potential for reducing viral testing volumes without compromising diagnostic accuracy.
Main Methods:
- Collected clinical data from 1,685 pediatric inpatients undergoing respiratory virus testing (2010-2012).
- Applied machine learning techniques to construct pre-test predictive models for viral infection.
- Utilized text mining to enhance model performance for specific viral tests.
Main Results:
- Machine learning models accurately predicted viral infection status based on available clinical data.
- Text mining improved prediction accuracy for certain viral tests.
- Cost-sensitive models demonstrated the potential to reduce viral test volumes by up to 46% for individual viral assays while maintaining acceptable specificity.
Conclusions:
- Electronic medical record data can be effectively leveraged to build predictive models.
- These models can assist clinicians in reducing unnecessary viral testing in pediatric inpatients.
- Implementing such data-driven strategies can lead to significant cost savings and improved healthcare efficiency.
Abstract:
Viral testing for pediatric inpatients with respiratory symptoms is common, with considerable associated charges. In an attempt to reduce testing volumes, we studied whether data available at the time of admission could aid in identifying children with low likelihood of having a particular viral origin of their symptoms, and thus safely forgo broad viral testing. We collected clinical data for 1,685 pediatric inpatients receiving respiratory virus testing from 2010-2012. Machine-learning on the data allowed us to construct pre-test models predicting whether a patient would test positive for a particular virus. Text mining improved the predictions for one viral test. Cost-sensitive models optimized for test sensitivity showed reasonable test specificities and an ability to reduce test volume by up to 46% for single viral tests. We conclude that diverse forms of data in the electronic medical record can be used productively to build models that help physicians reduce testing volumes.
Related Concept Videos
Respiratory Volumes
Tidal Volume (TV) Tidal volume (TV) is the air inhaled or exhaled in a...
Respiratory Volumes and Capacities
Respiratory Volumes and Capacities I
Assessment of Ventilation II: Respiratory Depth and Rhythm
Respiratory depth measures the volume of air inhaled or exhaled during a breath. It can vary from shallow to deep and typically remains consistent when a person is at rest or asleep. Occasionally, individuals will automatically inhale deeply, known as sighing, which inflates the lungs with more air than normal breathing.
To assess respiratory depth, observe the degree of chest excursion or movement:
Factors Affecting Pulmonary Ventilation
Alveolar Surface Tension
The alveolar fluid lines the luminal surface of the alveoli and exerts a force called surface tension. This force is caused by the polar water molecules in the liquid being more strongly attracted to each...
Assessment of Ventilation I: Respiratory Rate
A Ventilation assessment is critical for monitoring a patient's health status. Respiration, one of the most accessible vital signs, provides insights into the function of numerous body systems and can indicate serious health issues, such as brainstem injuries from head trauma.
Critical Guidelines for Assessing Ventilation:


