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Published on: July 26, 2024
Reversal of DDK-Mediated MCM Phosphorylation by Rif1-PP1 Regulates Replication Initiation and Replisome Stability
Robert C Alver1, Gaganmeet Singh Chadha1, Peter J Gillespie1
1Centre for Gene Regulation & Expression, School of Life Sciences, University of Dundee, Dundee DD1 5EH, UK.
Abstract:
Dbf4-dependent kinases (DDKs) are required for the initiation of DNA replication, their essential targets being the MCM2-7 proteins. We show that, in Xenopus laevis egg extracts and human cells, hyper-phosphorylation of DNA-bound Mcm4, but not phosphorylation of Mcm2, correlates with DNA replication. These phosphorylations are differentially affected by the DDK inhibitors PHA-767491 and XL413. We show that DDK-dependent MCM phosphorylation is reversed by protein phosphatase 1 (PP1) targeted to chromatin by Rif1. Loss of Rif1 increased MCM phosphorylation and the rate of replication initiation and also compromised the ability of cells to block initiation when challenged with replication inhibitors. We also provide evidence that Rif1 can mediate MCM dephosphorylation at replication forks and that the stability of dephosphorylated replisomes strongly depends on Chk1 activity. We propose that both replication initiation and replisome stability depend on MCM phosphorylation, which is maintained by a balance of DDK-dependent phosphorylation and Rif1-mediated dephosphorylation.
Insights
Dbf4-dependent kinases (DDKs) regulate DNA replication initiation by phosphorylating MCM proteins. Rif1-mediated dephosphorylation balances this, ensuring proper replisome stability and cell cycle control.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- DNA replication initiation is a tightly regulated process essential for cell division.
- Dbf4-dependent kinases (DDKs) target MCM2-7 proteins, crucial for replication.
- Understanding the regulation of MCM phosphorylation is key to controlling DNA replication.
Purpose of the Study:
- To investigate the role of MCM phosphorylation in DNA replication.
- To elucidate the regulatory mechanisms balancing MCM phosphorylation and dephosphorylation.
- To determine the impact of Rif1 and Chk1 on replication fidelity and stability.
Main Methods:
- Utilized Xenopus laevis egg extracts and human cell lines.
- Employed DDK inhibitors (PHA-767491, XL413) to study phosphorylation.
- Investigated the function of Rif1 and Chk1 in MCM dephosphorylation and replisome stability.
Main Results:
- Hyper-phosphorylation of DNA-bound Mcm4, not Mcm2, correlates with DNA replication.
- DDK-dependent MCM phosphorylation is reversed by Rif1-recruited protein phosphatase 1 (PP1).
- Loss of Rif1 enhances MCM phosphorylation, increases replication initiation rate, and impairs inhibitor response.
- Rif1 mediates MCM dephosphorylation at replication forks; replisome stability depends on Chk1.
Conclusions:
- Replication initiation and replisome stability are regulated by MCM phosphorylation.
- A balance between DDK-dependent phosphorylation and Rif1-mediated dephosphorylation maintains MCM phosphorylation.
- This balance is critical for controlling DNA replication initiation and ensuring genomic stability.
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