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Automated Segmentation of Cortical Grey Matter from T1-Weighted MRI Images
Published on: January 7, 2019
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White Matter and Gray Matter Segmentation in 4D Computed Tomography.
Rashindra Manniesing1, Marcel T H Oei2, Luuk J Oostveen2
1Department of Radiology and Nuclear Medicine, Radboud University Medical Center, Geert Grooteplein 10, 6525, GA, Nijmegen, the Netherlands. Rashindra.Manniesing@radboudumc.nl.
Scientific Reports
|March 10, 2017
Summary
This study presents an automated method for segmenting white matter (WM) and gray matter (GM) in 4D CT brain scans. The technique achieves good accuracy, enabling advanced functional and pathological analysis in neuroimaging.
Area of Science:
- Neuroimaging
- Medical Image Analysis
- Radiology
Background:
- Modern Computed Tomography (CT) scanners provide dynamic contrast information for the whole brain, combining functional and anatomical data.
- Accurate soft tissue segmentation, particularly for white matter (WM) and gray matter (GM), is crucial for perfusion analysis and automated detection of cerebral pathologies.
Purpose of the Study:
- To develop and validate an automated method for segmenting WM and GM in contrast-enhanced 4D CT images of the brain.
- To assess the accuracy and feasibility of this segmentation technique for neuroimaging applications.
Main Methods:
- The method involves intracranial segmentation using atlas registration, followed by refinement with a geodesic active contour model.
- Voxel features including intensity, contextual, and temporal information are extracted.
- A support vector machine (SVM) classifier is employed for WM and GM segmentation using the extracted features.
Main Results:
- The automated segmentation achieved high accuracy, with Dice coefficients of 0.81 ± 0.04 for WM and 0.79 ± 0.05 for GM.
- 95% Hausdorff distances were 3.86 ± 1.43 mm for WM and 3.07 ± 1.72 mm for GM.
- Cross-validation on 22 patients demonstrated the robustness and reliability of the segmentation method.
Conclusions:
- Automated segmentation of WM and GM in 4D CT brain images is feasible with good accuracy.
- This method supports advanced quantitative analysis of brain tissue in dynamic contrast-enhanced CT studies.
- The developed technique has potential applications in diagnosing and monitoring neurological conditions.
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