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Updated: Mar 6, 2026

Quantitative Mass Spectrometric Profiling of Cancer-cell Proteomes Derived From Liquid and Solid Tumors
Published on: February 27, 2015
Focus Issue: Cancer-Beyond tumor genetics to protein landscapes
Leslie K Ferrarelli1, Nancy R Gough2
1Associate Editor, Science Signaling, AAAS, Washington, DC 20005, USA. lferrare@aaas.org.
Abstract:
The proteins that regulate cell proliferation, metastatic potential, survival in circulation, and immune evasion represent most of the targets for therapeutic intervention in cancer. Furthermore, genomic profiling of just the cancer cells leaves critical information about the tumor microenvironment in the dark. The articles highlighted in this Focus Issue describe efforts to translate genomic data into knowledge of aberrant signaling that can be therapeutically targeted and strategies to explore not only the changes that occur in the protein landscape of the tumors but also in the protein profiles of the tumor microenvironment.
Insights
This research explores cancer therapeutic targets by analyzing protein profiles in both tumors and their microenvironments. Understanding these protein landscapes is crucial for developing effective cancer treatments.
Area of Science:
- Oncology
- Proteomics
- Genomics
Background:
- Cancer therapies often target proteins regulating cell proliferation, metastasis, survival, and immune evasion.
- Genomic profiling solely of cancer cells overlooks the critical tumor microenvironment.
- Aberrant signaling in cancer requires comprehensive protein analysis for effective therapeutic targeting.
Discussion:
- This Focus Issue highlights translating genomic data into therapeutically targetable aberrant signaling.
- Strategies are presented to analyze protein landscapes within tumors.
- Emphasis is placed on investigating protein profiles of the tumor microenvironment.
Key Insights:
- Integrating genomic and proteomic data enhances understanding of cancer signaling pathways.
- Analyzing the tumor microenvironment's protein profile is essential for comprehensive cancer research.
- Targeting aberrant signaling requires a holistic view of tumor and microenvironment proteins.
Outlook:
- Future cancer therapies may leverage combined genomic and proteomic analyses of tumors and their microenvironments.
- Developing novel therapeutic strategies requires a deeper understanding of protein dynamics in cancer.
- This work paves the way for more precise and effective cancer interventions.
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