Long non-coding RNA NEAT1 is a transcriptional target of p53 and modulates p53-induced transactivation and

Masashi Idogawa1,2, Tomoko Ohashi1,3, Yasushi Sasaki1,2

  • 1Department of Medical Genome Sciences, Research Institute for Frontier Medicine, Sapporo Medical University School of Medicine, Sapporo, Japan.

Insights

The tumor suppressor p53 directly targets the long non-coding RNA NEAT1. NEAT1 induction by p53 aids tumor suppression, suggesting a critical p53-NEAT1 network in cancer.

Area of Science:

  • Molecular Biology
  • Cancer Genetics
  • Non-coding RNA Research

Background:

  • The tumor suppressor p53 plays a crucial role in preventing cancer by regulating gene expression.
  • Understanding p53's direct transcriptional targets is key to elucidating its tumor-suppressive functions.
  • While protein-coding genes have been extensively studied, the role of long non-coding RNAs (lncRNAs) as p53 targets is an emerging area.

Purpose of the Study:

  • To identify novel direct transcriptional targets of p53, focusing on lncRNAs.
  • To investigate the functional role of the lncRNA NEAT1 in p53-mediated tumor suppression.
  • To explore the relationship between NEAT1 expression, p53 activity, and cancer prognosis.

Main Methods:

  • Analysis of next-generation chromatin immunoprecipitation-sequencing (ChIP-seq) data for p53 binding.
  • Experimental validation of NEAT1 as a direct transcriptional target of p53.
  • Assessment of NEAT1's impact on cancer cell growth and gene transactivation.
  • Correlation analysis between NEAT1 expression levels and patient prognosis in various cancers.

Main Results:

  • The lncRNA NEAT1 was identified as a direct transcriptional target of p53 using ChIP-seq data.
  • Suppression of NEAT1 induction by p53 was found to reduce p53's inhibitory effect on cancer cell growth.
  • NEAT1 modulates gene transactivation, including that of other lncRNAs.
  • Low expression of NEAT1 is significantly associated with poor prognosis in several types of cancer.

Conclusions:

  • NEAT1 induction is a critical component of the tumor-suppressor function of p53.
  • The p53-NEAT1 axis represents a novel transcriptional network involved in diverse biological functions and tumor suppression.
  • NEAT1 may serve as a potential biomarker for cancer prognosis and a therapeutic target.

Related Concept Videos

lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...
10.0K
lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

3.8K
Abnormal Proliferation02:23

Abnormal Proliferation

Under normal conditions, most adult cells remain in a non-proliferative state unless stimulated by internal or external factors to replace lost cells. Abnormal cell proliferation is a condition in which the cell's growth exceeds and is uncoordinated with normal cells. In such situations, cell division persists in the same excessive manner even after cessation of the stimuli, leading to persistent tumors. The tumor arises from the damaged cells that replicate to pass the damage to the...
5.3K
Negative Regulator Molecules01:23

Negative Regulator Molecules

Positive regulators allow a cell to advance through cell cycle checkpoints. Negative regulators have an equally important role as they terminate a cell’s progression through the cell cycle—or pause it—until the cell meets specific criteria.
38.7K
Types of RNA01:20

Types of RNA

Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in regulating gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA Performs Diverse...
10.2K
Types of RNA01:23

Types of RNA

Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
73.5K