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Published on: March 16, 2012
Genetic Analysis of the IncX4 Plasmids: Implications for a Unique Pattern in the mcr-1 Acquisition
Jian Sun1,2, Liang-Xing Fang1,2, Zuowei Wu3
1National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou, People's Republic of China.
Abstract:
IncX4 plasmids are associated with the dissemination of the mcr-1 genes in Enterobacteriaceae. We screened IncX4 plasmids among 2,470 isolates of Enterobacteriaceae and determined the mcr-1 positive isolates. Forty-three isolates were observed to carry IncX4 type plasmid, among which 13 were identified to carry mcr-1 gene. Three representative mcr-1-positive IncX4 plasmids were selected for high-throughput sequencing. Comparative genomics showed that the mcr-1-carrying IncX4 plasmids exhibit remarkable similarity in the backbone, and the major distinction lies in the region containing mcr-1. The major variable regions of all the IncX4 plasmids were fully characterized by PCR-RFLP. The results revealed that the mcr-1 was located on the Variable Region I of IncX4 plasmids in 11 E. coli isolates. Among them, nine E. coli strains possess an epidemic pCSZ4-like IncX4 plasmid containing mcr-1. ISApl1 was presumably involved in the transposition of the mcr-1 cassette and then was lost. Similar genetic contexts were found in different plasmids, even the E. coli chromosome, implying the acquisition of mcr-1 by a unique common mechanism.
Insights
IncX4 plasmids carry the mcr-1 gene, a key factor in antibiotic resistance. This study identified mcr-1 on IncX4 plasmids in Enterobacteriaceae, revealing a common mechanism for its spread.
Area of Science:
- Microbiology
- Genetics
- Antimicrobial Resistance
Background:
- IncX4 plasmids are known vehicles for the spread of antimicrobial resistance genes.
- The mcr-1 gene confers resistance to colistin, a critical last-resort antibiotic.
Purpose of the Study:
- To screen Enterobacteriaceae isolates for IncX4 plasmids and identify those carrying the mcr-1 gene.
- To characterize the genetic context and variability of mcr-1-positive IncX4 plasmids.
Main Methods:
- Screening of 2,470 Enterobacteriaceae isolates.
- High-throughput sequencing of selected plasmids.
- Comparative genomics and PCR-RFLP analysis of variable regions.
Main Results:
- Forty-three isolates carried IncX4 plasmids, with 13 harboring the mcr-1 gene.
- mcr-1 was predominantly located in Variable Region I of IncX4 plasmids.
- Nine E. coli strains possessed an epidemic pCSZ4-like IncX4 plasmid with mcr-1.
- The insertion sequence ISApl1 was implicated in mcr-1 transposition.
Conclusions:
- IncX4 plasmids are significant carriers of the mcr-1 gene in Enterobacteriaceae.
- A conserved genetic context suggests a common acquisition mechanism for mcr-1.
- Understanding these mechanisms is crucial for combating colistin resistance.
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