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Updated: Mar 5, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Genomic decision support needs in pediatric primary care
Jeffrey W Pennington1, Dean J Karavite1, Edward M Krause1
1Department of Biomedical and Health Informatics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Insights
Clinical genome sequencing aids in diagnosing rare pediatric conditions. An electronic health record (EHR) tool could improve care coordination for these complex cases.
Area of Science:
- Genomics and Bioinformatics
- Pediatric Medicine
- Health Informatics
Background:
- Clinical genome and exome sequencing diagnose pediatric patients with complex conditions.
- The American Academy of Pediatrics highlights the medical home's role in coordinating multidisciplinary care.
- Electronic health records (EHRs) with clinical decision support are crucial for managing these patients.
Purpose of the Study:
- To assess clinician experiences with complex genetic findings.
- To evaluate current EHR support for coordinating care in rare pediatric genetic conditions.
- To design and test a novel EHR clinical decision support application.
Main Methods:
- Interviews with 6 clinicians caring for pediatric patients with rare genetic findings.
- Design of a candidate EHR clinical decision support application mock-up.
- Formative exploratory user testing of the mock-up with 26 pediatric primary care providers.
Main Results:
- Clinicians agreed that current EHRs offer limited support for managing complex genetic cases.
- User testing indicated that the designed EHR application mock-up would effectively assist in care coordination.
- The proposed EHR functionality demonstrated potential utility in practice for specific clinical scenarios.
Conclusions:
- Further development of EHR clinical decision support tools is warranted for pediatric rare genetic conditions.
- Improved EHR integration can enhance the coordination of care for patients with complex genomic diagnoses.
- These tools can support primary care pediatricians in navigating multidisciplinary care for rare diseases.
Abstract:
Clinical genome and exome sequencing can diagnose pediatric patients with complex conditions that often require follow-up care with multiple specialties. The American Academy of Pediatrics emphasizes the role of the medical home and the primary care pediatrician in coordinating care for patients who need multidisciplinary support. In addition, the electronic health record (EHR) with embedded clinical decision support is recognized as an important component in providing care in this setting. We interviewed 6 clinicians to assess their experience caring for patients with complex and rare genetic findings and hear their opinions about how the EHR currently supports this role. Using these results, we designed a candidate EHR clinical decision support application mock-up and conducted formative exploratory user testing with 26 pediatric primary care providers to capture opinions on its utility in practice with respect to a specific clinical scenario. Our results indicate agreement that the functionality represented by the mock-up would effectively assist with care and warrants further development.
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