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Published on: March 10, 2020
Anaerobic bacteria in the intestinal microbiota of Brazilian children
Silvia T Talarico1, Florenza E Santos1, Katia Galeão Brandt2
1Universidade de São Paulo, Faculdade de Ciências Farmacêuticas, Departamento de Análises Clínicas e Toxicológicas, São Paulo/SP, Brazil.
Insights
Bifidobacterium dominated the infant gut microbiota in the first year, with Escherichia coli also abundant. Anaerobic bacteria like Faecalibacterium prausnitzii emerged later, influenced by environment and socioeconomic factors.
Area of Science:
- Microbiology
- Infant Gut Microbiome Research
- Neonatal Health
Background:
- Neonatal gut microbiota development is crucial for infant health.
- Anaerobic bacteria colonize the neonatal gut environment.
- Early life microbial colonization influences long-term health outcomes.
Purpose of the Study:
- To evaluate the colonization patterns of Bifidobacterium, Lactobacillus, and Lactococcus in Brazilian infants during their first year.
- To correlate these bacterial levels with Escherichia coli abundance.
- To assess the presence of anaerobic bacteria like Eubacterium limosum and Faecalibacterium prausnitzii.
Main Methods:
- Collection of fecal samples from 12 Brazilian infants over their first year of life.
- Real-time PCR detection of 16S rRNA for anaerobic and facultative bacteria.
- Analysis of Bifidobacterium, Lactobacillus, Lactococcus, Escherichia coli, Eubacterium limosum, and Faecalibacterium prausnitzii presence.
Main Results:
- Bifidobacterium showed the highest levels throughout the first year.
- Escherichia coli and Lactobacillus were also consistently detected.
- Faecalibacterium prausnitzii was primarily detected in later samples, while Eubacterium limosum was rare.
Conclusions:
- Infant gut microbiota composition aligns with global findings for milk-fed infants.
- Environmental factors, indicated by high E. coli abundance, influence intestinal colonization.
- Anaerobic genera were present in Brazilian infants from lower socioeconomic backgrounds, similar to developed countries.
Objective::
Changes in the neonatal gut environment allow for the colonization of the mucin layer and lumen by anaerobic bacteria. The aim of the present study was to evaluate Bifidobacterium, Lactobacillus and Lactococcus colonization through the first year of life in a group of 12 Brazilian infants and to correlate these data with the levels of Escherichia coli. The presence of anaerobic members of the adult intestinal microbiota, including Eubacterium limosum and Faecalibacterium prausnitzii, was also evaluated.
Methods::
Fecal samples were collected during the first year of life, and 16S rRNA from anaerobic and facultative bacteria was detected by real-time PCR.
Results::
Bifidobacterium was present at the highest levels at all of the studied time points, followed by E. coli and Lactobacillus. E. limosum was rarely detected, and F. prausnitzii was detected only in the samples from the latest time points.
Conclusion::
These results are consistent with reports throughout the world on the community structure of the intestinal microbiota in infants fed a milk diet. Our findings also provide evidence for the influence of the environment on intestinal colonization due to the high abundance of E. coli. The presence of important anaerobic genera was observed in Brazilian infants living at a low socioeconomic level, a result that has already been well established for infants living in developed countries.
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