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How to Name and Classify Your Phage: An Informal Guide.
Evelien Adriaenssens1,2, J Rodney Brister3,4
1Microbiology Research Group, Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, UK. evelien.adriaenssens@gmail.com.
Viruses
|April 4, 2017
Summary
This guide helps researchers name and classify newly discovered bacteriophages. It simplifies the process from the individual phage level to official taxonomy, aiding database accuracy and research consistency.
Area of Science:
- Microbiology
- Virology
- Bioinformatics
Background:
- Bacteriophage discovery yields numerous isolates requiring formal identification.
- Accurate phage naming and classification are crucial for database integrity and scientific communication.
- Existing phage taxonomy processes can be complex for individual researchers.
Purpose of the Study:
- To provide an informal guide for bacteriophage naming and classification.
- To assist both novice and experienced researchers in post-discovery phage stages.
- To offer a practical, "bottom-up" approach from the phage isolate level.
Main Methods:
- Development of an informal, practical guide for phage researchers.
- Focus on the stages of naming and classification following phage isolation.
- Explanation of the role of the Bacterial and Archaeal Viruses Subcommittee (BAVS) and the International Committee on the Taxonomy of Viruses (ICTV).
Main Results:
- A simplified framework for bacteriophage nomenclature.
- Guidance on navigating the complexities of phage classification.
- Empowerment of researchers to contribute accurately to phage taxonomy.
Conclusions:
- This guide demystifies phage naming and classification for researchers.
- Standardized approaches enhance the long-term reliability of phage databases and scientific records.
- Facilitating accurate classification supports the broader field of virology and microbial ecology.