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Interinstitutional collaboration for end-user bioinformatics training: Cytoscape as a case study.

Marci D Brandenburg, Rolando Garcia-Milian

    Journal of the Medical Library Association : JMLA
    |April 6, 2017
    PubMed
    Summary

    Interinstitutional collaboration successfully trained biomedical researchers in Cytoscape data visualization. Librarians bridged training gaps in bioinformatics, enhancing support for molecular data analysis.

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    Area of Science:

    • Biomedical Informatics
    • Data Visualization
    • Bioinformatics

    Background:

    • Highlights the need for specialized training in data visualization for biomedical researchers.
    • Identifies Cytoscape network analysis software as a key tool in bioinformatics.
    • Addresses the challenge of keeping research support skills current in rapidly evolving scientific fields.

    Purpose of the Study:

    • To demonstrate the value of interinstitutional collaboration for researcher training.
    • To provide Yale University biomedical researchers with training in Cytoscape software.
    • To leverage expertise from one institution to support another.

    Main Methods:

    • A collaboration between librarians from Yale University Medical Library and the University of Michigan.

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  • Delivery of training through a webinar and an onsite workshop.
  • Utilizing a bioinformationist with Cytoscape expertise from the University of Michigan.

    • Main Results:

    • Yale biomedical researchers and librarians received training on Cytoscape.
    • The collaboration established a resource for ongoing support and future questions.
    • The University of Michigan bioinformationist's expertise was shared effectively.

    Conclusions:

    • Interinstitutional collaboration is an effective model for addressing end-user training gaps.
    • This initiative positioned the Yale Medical Library as a leader in molecular data analysis support.
    • The collaboration enhanced the instructor's role and established a valuable training partnership.