Identification of Fungal Species in Brain Tissue from Alzheimer's Disease by Next-Generation Sequencing
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Updated: Oct 13, 2026

Detection of Neuritic Plaques in Alzheimer's Disease Mouse Model
Published on: July 26, 2011
Abstract:
The possibility that patients diagnosed with Alzheimer's disease (AD) have disseminated fungal infection has been recently advanced by the demonstration of fungal proteins and DNA in nervous tissue from AD patients. In the present study, next-generation sequencing (NGS) was used to identify fungal species present in the central nervous system (CNS) of AD patients. Initially, DNA was extracted from frozen tissue from four different CNS regions of one AD patient and the fungi in each region were identified by NGS. Notably, whereas a great variety of species were identified using the Illumina platform, Botrytis cinerea and Cryptococcus curvatus were common to all four CNS regions analyzed. Further analysis of entorhinal/cortex hippocampus samples from an additional eight AD patients revealed a variety of fungal species, although some were more prominent than others. Five genera were common to all nine patients: Alternaria, Botrytis, Candida, Cladosporium, and Malassezia. These observations could be used to guide targeted antifungal therapy for AD patients. Moreover, the differences found between the fungal species in each patient may constitute a basis to understand the evolution and severity of clinical symptoms in AD.
Insights
Fungal infections may be present in Alzheimer's disease (AD) patients' central nervous system (CNS). Next-generation sequencing identified common fungal genera across multiple AD patients, suggesting potential therapeutic targets.
Area of Science:
- Mycology
- Neurology
- Genomics
Background:
- Emerging evidence suggests a link between fungal presence and Alzheimer's disease (AD).
- Fungal proteins and DNA have been detected in the nervous tissue of AD patients.
Purpose of the Study:
- To identify fungal species within the central nervous system (CNS) of Alzheimer's disease patients using next-generation sequencing (NGS).
- To explore potential fungal targets for antifungal therapy in AD management.
Main Methods:
- DNA extraction from frozen CNS tissue samples of nine AD patients.
- Next-generation sequencing (NGS) to identify fungal DNA in different CNS regions.
- Comparative analysis of fungal species across multiple patients and CNS regions.
Main Results:
- NGS identified a variety of fungal species in the CNS of AD patients.
- Botrytis cinerea and Cryptococcus curvatus were consistently found in all analyzed regions of one patient.
- Five fungal genera (Alternaria, Botrytis, Candida, Cladosporium, Malassezia) were common across all nine patients.
Conclusions:
- The presence of specific fungal species in the CNS of AD patients is confirmed.
- Identified fungal genera may serve as targets for developing novel antifungal therapies for AD.
- Fungal species variations might correlate with the clinical progression and severity of Alzheimer's disease symptoms.
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