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Related Concept Videos

Morphogenesis02:19

Morphogenesis

Plant morphogenesis—the development of a plant’s form and structure—involves several overlapping developmental processes, including growth and cell differentiation. Precursor cells differentiate into specific cell types, which are organized into the tissues and organ systems that make up the functional plant.
Microbial Morphologies01:29

Microbial Morphologies

Bacterial and archaeal cells exhibit remarkable diversity in shape and structure, critical in their adaptability and functionality. Among bacteria, the most commonly observed shapes include cocci and bacilli. Cocci are spherical and may exist singly or in groupings such as pairs (diplococci), chains (streptococci), clusters (staphylococci), or tetrads. Bacilli, in contrast, are rod-shaped and can also occur as single cells, in pairs, or chains, depending on their environmental and genetic...

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Related Experiment Video

Updated: Jun 15, 2026

Morphology-Based Distinction Between Healthy and Pathological Cells Utilizing Fourier Transforms and Self-Organizing Maps
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Morphology-Based Distinction Between Healthy and Pathological Cells Utilizing Fourier Transforms and Self-Organizing Maps

Published on: October 28, 2018

Open data and digital morphology.

Thomas G Davies1, Imran A Rahman1,2, Stephan Lautenschlager1,3

  • 1School of Earth Sciences, University of Bristol, Life Sciences Building, Tyndall Avenue, Bristol BS8 1TQ, UK.

Proceedings. Biological Sciences
|April 14, 2017
PubMed
Summary
This summary is machine-generated.

Digital specimen analysis has advanced research, but data sharing remains a challenge. This study proposes standards for 3D digital data publication to improve accessibility and reproducibility in biological studies.

Keywords:
computed tomographydigital datafunctional analysisphenotypethree-dimensional modelsvisualization

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Last Updated: Jun 15, 2026

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Area of Science:

  • Digital Morphology and Paleontology
  • Biodiversity Informatics
  • Scientific Data Management

Background:

  • Digital visualization and analysis methods (3D/4D) have revolutionized the study of organisms.
  • Despite advancements, the widespread accessibility and free availability of underlying digital datasets remain unfulfilled.
  • Lack of readily available data hinders study verification, reproducibility, and data reuse.

Purpose of the Study:

  • To address the lack of standardized data sharing in digital morphology research.
  • To propose recommendations for minimum standards and best practices for 3D digital data publication.
  • To review challenges related to data storage, management, and accessibility.

Main Methods:

  • Review of current practices in digital morphology data publication.
  • Development of proposed standards for 3D digital data sharing.
  • Analysis of issues concerning data storage, management, and accessibility.

Main Results:

  • Identified a significant gap between the promise and reality of digital data accessibility in organismal studies.
  • Highlighted the absence of agreed-upon policies for data sharing alongside digital morphology publications.
  • Proposed a set of recommendations for minimum standards and best practices for 3D digital data publication.

Conclusions:

  • Establishing clear standards for 3D digital data publication is crucial for scientific reproducibility and data reuse.
  • Addressing data storage, management, and accessibility is essential to fully realize the potential of digital morphology.
  • Implementing proposed recommendations will enhance the transparency and collaborative potential of research using digital specimens.